Gene Rsph17025_0707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0707 
Symbol 
ID5084066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp716555 
End bp717253 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content64% 
IMG OID640482265 
Productmethionine synthase 
Protein accessionYP_001166918 
Protein GI146276759 
COG category[R] General function prediction only 
COG ID[COG5012] Predicted cobalamin binding protein 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.784551 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACG ACGAAGAGAT CATCCTGTCC GAACTCGACG ACGAGGAACT CGTGCTGCAG 
ATGCACGACG ACCTCTATGA CGGGATGAAG GACGAGATCG AGGAGGGCGT CCGGATCCTC
ATCGAGCGCG GCTGGACGCC CTACGACGTG CTGACGCGCG CGCTGGTGGC GGGCATGACC
ATCGTGGGCA ACGACTTCCG CGACGGCATC CTCTTCGTGC CGGAAGTGCT GCTCGCGGCG
AACGCGATGA AGGGGGGGAT GGTGATCCTC AAGCCGATGC TGGTCGAGAC CGGGGCGCCG
CGGATGGGCA AGATGGTGAT CGGCACGGTC AAGGGCGACA TCCACGACAT CGGCAAGAAC
CTCGTCGCGA TGATGATGGA GGGTGCGGGC TTCGAGGTGG TGGATCTGGG AATCAACAAC
GCGGTCGAGA AATATCTCGA GGCTCTGGAG ACGGAAAAGC CCGACATCCT CGGCATGTCG
GCGCTGCTGA CCACCACCAT GCCCTACATG AAGGTCGTGA TCGACACGCT GAAGGAAAAG
GGCCTGCGCG ACGACTATAT CGTGCTGGTG GGCGGCGCGC CGCTGAACGA GGAGTTCGGG
CGGGCGATCG GCGCCGATGC CTACTGCCGC GACGCCGCGG TGGCGGTCGA GACGGCGAAG
GTGCATGTTG CGCGCCGCCA CAACCGGATG AACGCCTGA
 
Protein sequence
MADDEEIILS ELDDEELVLQ MHDDLYDGMK DEIEEGVRIL IERGWTPYDV LTRALVAGMT 
IVGNDFRDGI LFVPEVLLAA NAMKGGMVIL KPMLVETGAP RMGKMVIGTV KGDIHDIGKN
LVAMMMEGAG FEVVDLGINN AVEKYLEALE TEKPDILGMS ALLTTTMPYM KVVIDTLKEK
GLRDDYIVLV GGAPLNEEFG RAIGADAYCR DAAVAVETAK VHVARRHNRM NA