Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0707 |
Symbol | |
ID | 5084066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 716555 |
End bp | 717253 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640482265 |
Product | methionine synthase |
Protein accession | YP_001166918 |
Protein GI | 146276759 |
COG category | [R] General function prediction only |
COG ID | [COG5012] Predicted cobalamin binding protein |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.784551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACG ACGAAGAGAT CATCCTGTCC GAACTCGACG ACGAGGAACT CGTGCTGCAG ATGCACGACG ACCTCTATGA CGGGATGAAG GACGAGATCG AGGAGGGCGT CCGGATCCTC ATCGAGCGCG GCTGGACGCC CTACGACGTG CTGACGCGCG CGCTGGTGGC GGGCATGACC ATCGTGGGCA ACGACTTCCG CGACGGCATC CTCTTCGTGC CGGAAGTGCT GCTCGCGGCG AACGCGATGA AGGGGGGGAT GGTGATCCTC AAGCCGATGC TGGTCGAGAC CGGGGCGCCG CGGATGGGCA AGATGGTGAT CGGCACGGTC AAGGGCGACA TCCACGACAT CGGCAAGAAC CTCGTCGCGA TGATGATGGA GGGTGCGGGC TTCGAGGTGG TGGATCTGGG AATCAACAAC GCGGTCGAGA AATATCTCGA GGCTCTGGAG ACGGAAAAGC CCGACATCCT CGGCATGTCG GCGCTGCTGA CCACCACCAT GCCCTACATG AAGGTCGTGA TCGACACGCT GAAGGAAAAG GGCCTGCGCG ACGACTATAT CGTGCTGGTG GGCGGCGCGC CGCTGAACGA GGAGTTCGGG CGGGCGATCG GCGCCGATGC CTACTGCCGC GACGCCGCGG TGGCGGTCGA GACGGCGAAG GTGCATGTTG CGCGCCGCCA CAACCGGATG AACGCCTGA
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Protein sequence | MADDEEIILS ELDDEELVLQ MHDDLYDGMK DEIEEGVRIL IERGWTPYDV LTRALVAGMT IVGNDFRDGI LFVPEVLLAA NAMKGGMVIL KPMLVETGAP RMGKMVIGTV KGDIHDIGKN LVAMMMEGAG FEVVDLGINN AVEKYLEALE TEKPDILGMS ALLTTTMPYM KVVIDTLKEK GLRDDYIVLV GGAPLNEEFG RAIGADAYCR DAAVAVETAK VHVARRHNRM NA
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