Gene Rsph17025_0705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0705 
Symbol 
ID5084064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp714212 
End bp715585 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content71% 
IMG OID640482263 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_001166916 
Protein GI146276757 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR00387] glycolate oxidase, subunit GlcD 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG ACGCGGCGCT GGGTGAACTC GAGGCGGTGC TGGGAGAGCG GCTCTCGCGC 
TCGCGCCCGG TGCGCGAGCA GCACGCCCAC AGCGAGACCC ACCTGAGGTC CGGCCCGCCG
GATGCGGTGG CCTTCCCGCG CTCGGCCGCC GAGGTGGCGC GGATCGCCGA GATCTGCACA
CGGCATCTGG TGCCGATGGT GGGCTGGGGC GCGGGAACGT CGCTCGAGGG TCATGCGCTG
GCGCTGCGCG GCGGGGTCAC GATCGACTTC GCCCAGATGG ACCAGATCCT CGAGATGCGC
CCCGAGGACA TGATCGTCCG TGTCCAGCCC GGCATCACGC GAGAGGCGCT GAACGCGGCG
CTCCGCGACA CGGGGCTGTT CTTCCCGGTC GATCCGGGCG CCAATGCCAG CATCGGCGGC
ATGGCCGCCA CGCGGGCCTC GGGCACCACG GCCGTCCGCT ACGGCACGAT GCGCGACAAT
GTGCTGGGGC TCGAGGTGGT GCTGGCCGAC GGGCGGATGA TCCGCACCGG CACCGCGGCG
CCGAAGAGCG CGGCGGGCTA CGACCTGACC GCGCTCTTCG TGGGCTCCGA GGGGACGCTC
GGCCTGATCA CCGAACTGAC GCTTCGGCTG CATGGCCAGC CCGAGGCGGT TTCGGCCGCC
GTCTGCGCCT TCCCCGACAT GTCCTCGGCG GTGAACTGCG TGATCGAGAC GATCCAGCAC
GGCATCCCGA TGGCGCGGAT CGAGTTCCTC GATGCGGCCA CGGTGGCGGC CTGCAACGCC
TACGCCCAGA TGGAGATGCC GCTTCAGCCG CATCTCATGA TCGAGTTCCA CGGCACCGAG
GCGGGCGTGG CCGAGCAGGC GGAACGGTTC GGCGAGATCG CGGCCGGGCA CGGCTCGGCC
GACTTCCAGT GGGCCACCCG CACCGAGGAC CGGGCGCGGC TGTGGAAGAT GCGCCACGCC
GCCTACCGCG CCTGTCTGGC CATGCGCCCC GGCTGCGAGG GCTGGGTGAC GGACGCCTGC
GTTCCGATCT CGCGGCTGGC CGAGGCGGTC GAGGAGACTC AGGCCGACAT CGCGGCCTGC
GGCGTGCCGG GGCCGATGGT GGGCCATGTC GGCGACGGCA ACTTCCACTC GGTCCTGCTG
GTCGATCCCG AGAGCGAGAC GGAACGCGAA GCCGCCAAGC GCGTTTCCGC CCGGCTGGCC
GAGCGGGCGC TGCGCCTTGG CGGGACCGTC ACGGGCGAAC ACGGCATCGG CTTTGGCAAG
CTTGGCTACA TGGCGGCCGA GCATGGCGAG GGCTGGATGG TGATGGGCGA GATCAAGCGG
GCGCTGGATC CGCATGGGCT GATGAACCCC GGCAAGATGG TGAGCCAGAC ATGA
 
Protein sequence
MRIDAALGEL EAVLGERLSR SRPVREQHAH SETHLRSGPP DAVAFPRSAA EVARIAEICT 
RHLVPMVGWG AGTSLEGHAL ALRGGVTIDF AQMDQILEMR PEDMIVRVQP GITREALNAA
LRDTGLFFPV DPGANASIGG MAATRASGTT AVRYGTMRDN VLGLEVVLAD GRMIRTGTAA
PKSAAGYDLT ALFVGSEGTL GLITELTLRL HGQPEAVSAA VCAFPDMSSA VNCVIETIQH
GIPMARIEFL DAATVAACNA YAQMEMPLQP HLMIEFHGTE AGVAEQAERF GEIAAGHGSA
DFQWATRTED RARLWKMRHA AYRACLAMRP GCEGWVTDAC VPISRLAEAV EETQADIAAC
GVPGPMVGHV GDGNFHSVLL VDPESETERE AAKRVSARLA ERALRLGGTV TGEHGIGFGK
LGYMAAEHGE GWMVMGEIKR ALDPHGLMNP GKMVSQT