| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0687 |
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| Symbol | |
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| ID | 5082957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 694826 |
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| End bp | 696271 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640482245 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001166898 |
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| Protein GI | 146276739 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.200286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCC TCTGGACCTC CGACGAGGCC TCGGCCGCCA CGGGCGGCCG CGCCACCCGC
GCCTTCTCCG CGACCGGCGT CTCGATCGAC AGCCGCACGC TCCGCCCCGG CGACCTCTTC
GTGGCGCTCA AGGACCAGCG CGACGGCCAC GCGTTCGTGG CCCAGGCGCT GGCCAACGGG
GCCGCCGCGG CCCTCGTCTC GCGCATCCCC GACGGCCTGA CCGACGGCGC GCCGCTCCTC
CTCGTTCCTG ACGTTCTCGA AGCGCTCGCA GCCCTCGGCC GTGCGGCCCG TGCGCGGTCC
CGCGCCCGCG TGATCGGCGT GACGGGCTCG GTCGGCAAGA CCTCGACCAA GGAGATGCTT
CGCGCGGCGC TGCGCGGGCA GGGCACGGTC CATGCCGCCG AGGCCTCCTA CAACAATCAC
TGGGGCGTGC CGCTCACGCT CGCCCGGATG CCGGCCGACG TGGATTTCGC CGTGATCGAG
ATCGGCATGA ACCACCCCGG CGAGATCGCG CCGCTCGCGC GCCTGGCCCG CCCGCATCTG
GCGCTCATCA CCACGGTCGC CCCCGCCCAT CTCGAGGCGT TCGACAGCAT GACGGCCATC
GCCGAAGAGA AGGCCGCGAT CCTCGAGGGG CTCGAGCCCG GCGGTCTCGC GATCCTGCCC
GCCGATCTCG AGGTGACGCC GGTCCTCGCG GCGCGGGCCT CGGCGCTCGG TGTGCCGGCC
ATGACCTTCG GCCAGTCCGG CGCGGCCGAC TGGCGCCTCT CCGACATCCA GATCACGCCC
GAGGCCACGA TCGCCCGCGC CAGTCACGCC GACCAGACCT TCCTCTTCAA GGTGCTGACG
CCGGGGCGGC ACTTCGCGGC CAATGCGCTT GCGGTGCTGG CCGCCGCCGA GGCGCTCGGC
CTCGATCTCA CCATCACGGC CTGCGATCTC GGACTCTGGT CGCCGCCCGC CGGCCGCGGC
ACGCGCGAGC GCATCGCCCT CGATCCGGTG GACGAGGCGG GCTTCGACCT GATCGACGAT
GCCTTCAACG CCAACCCGGC CTCGGTCGCG GCCAGTCTTG AGCTGCTGGC CGCGATGGCG
CCGACCGACG GGGTGGGGCG CATCTCGACC GGCCGCCGCA TCGCGATCCT CGGCGACATG
CTCGAACTCG GCCCGACGGA GGCTGCGCTT CACCGCGCCG TCGCCGACCA TCCCGCTCTG
GCCGGCATCG CGCTTGTCCA TTGCGTCGGG CCGCGGATGC GGGCCCTGCA CGAGGCGCTG
CCCCGCCGCC AGCGCGGCGA GTGGGTCGAG ACGGCGGCCG AGCTGGTGCC GAGGGCGCGG
CTTCTGGTCG ATGCCGGCGA CATCGTGCTG GTGAAAGGCT CGAAGGGGAT CAAGGTCAGC
CTGGTGGTTG ACGCGCTCCG CAAACTGGGT CAGTCCGGCC CATCCAGGAC CCGAGGGGCC
GAGTAG
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| Protein sequence | MTPLWTSDEA SAATGGRATR AFSATGVSID SRTLRPGDLF VALKDQRDGH AFVAQALANG
AAAALVSRIP DGLTDGAPLL LVPDVLEALA ALGRAARARS RARVIGVTGS VGKTSTKEML
RAALRGQGTV HAAEASYNNH WGVPLTLARM PADVDFAVIE IGMNHPGEIA PLARLARPHL
ALITTVAPAH LEAFDSMTAI AEEKAAILEG LEPGGLAILP ADLEVTPVLA ARASALGVPA
MTFGQSGAAD WRLSDIQITP EATIARASHA DQTFLFKVLT PGRHFAANAL AVLAAAEALG
LDLTITACDL GLWSPPAGRG TRERIALDPV DEAGFDLIDD AFNANPASVA ASLELLAAMA
PTDGVGRIST GRRIAILGDM LELGPTEAAL HRAVADHPAL AGIALVHCVG PRMRALHEAL
PRRQRGEWVE TAAELVPRAR LLVDAGDIVL VKGSKGIKVS LVVDALRKLG QSGPSRTRGA
E
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