Gene Rsph17025_0679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0679 
Symbol 
ID5082949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp685502 
End bp686647 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content74% 
IMG OID640482237 
Productbenzoate transporter 
Protein accessionYP_001166890 
Protein GI146276731 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3135] Uncharacterized protein involved in benzoate metabolism 
TIGRFAM ID[TIGR00843] benzoate transporter 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0176509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTTT CACTTCTTTC GGCGGCCGTG GTGGCCGCGC TCGTCGGCTA TGGCTCGACC 
ATCGCGCTGG TGCTGGCCGC CGCCGCGGCG GTCGGCGCAA GCGAGGCGCA GACGGCCAGC
TGGGTGCTGG CCCTCTGCCT TGGCAAGGCC ATGGGCAGCG CGTTCCTGAG TTGGCAGAGC
CGGGTTCCGG TGGTGCTGGC CTGGTCCACG CCCGGAGCGG CGCTGGTCGC CGCCAGCGAA
GGGGTCACGA TGGCCGAGGC CGTGGGCGCC TTCGTTCTGG CCGGCGGGCT GATCGCGCTG
ACCGGGGCGC TCCGCCCGCT CGGCCGGGCG GTGGCGCTGA TCCCCGACGG GATCGCGGCC
GGAATGCTGG CGGGCGTGCT GCTGCCCTTC TGCCTCAAGC TGGCTGGCGC GGCCGAGGCG
CTTCCGCTGC TGGTGCTGCC GGCGATCGCG GTCTTCGCGC TCGTGCGGCT CTGGAACCCG
GCCTTTGCGG TGCTGGCCGC GCTTGCGGGC GGCAGCGCGC TGGCCTTTGC CGGAGAGGCC
GCGCTGCCCG CGATCCCCCT CGCCTTGCCC ACGCTGGCCC TCATCGCGCC CGAGTTCGAT
GCGGCGGCCC TGATCGGGCT TGGCCTGCCG CTCTATTTCG TGACGATGGC CTCGCAGAAC
CTGCCGGGCT TTGCGGTGCT GCGCGCCGCG GGCTACGAGC CGCCGGTGCG CAGCGCCCTG
ACGGTGACGG GCGGGCTTTC GGCCCTGATC GCGCCCTGCG GCGGCCATAC GATCTCGATG
GCCGCGATCA CCGCGGCGAT CTGCCTGGGC GATGAGGTGC ACCCGGATCG CGGCCGCCGC
TGGATCGTGG GCCTTGTCTA TGCCGGTGTC TGGTTGGCGC TTGGCCTTTT TGGGCCGGCG
ATCCTCGCCT GCATCGCGGC CCTGCCGCCC GCACTGGTCG CCGCGCTGGT CGGGCTCGCG
CTGCTCGGCC CGCTGACCGG GGCCATGACG GCGGCCTTCG CCGCGCCCGA ACAACGATTC
GCGGCCGTGG TCACGCTGGC GGTTACGGGA TCGGGCGTGG CGATCCTGGG GATCGGCGGC
GCCTTCTGGG GCCTTGCGGC CGGGCTGGCC GTTCACGCGA TGGAGCGGGC AGCGCGCCGG
GCCTGA
 
Protein sequence
MRLSLLSAAV VAALVGYGST IALVLAAAAA VGASEAQTAS WVLALCLGKA MGSAFLSWQS 
RVPVVLAWST PGAALVAASE GVTMAEAVGA FVLAGGLIAL TGALRPLGRA VALIPDGIAA
GMLAGVLLPF CLKLAGAAEA LPLLVLPAIA VFALVRLWNP AFAVLAALAG GSALAFAGEA
ALPAIPLALP TLALIAPEFD AAALIGLGLP LYFVTMASQN LPGFAVLRAA GYEPPVRSAL
TVTGGLSALI APCGGHTISM AAITAAICLG DEVHPDRGRR WIVGLVYAGV WLALGLFGPA
ILACIAALPP ALVAALVGLA LLGPLTGAMT AAFAAPEQRF AAVVTLAVTG SGVAILGIGG
AFWGLAAGLA VHAMERAARR A