Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0679 |
Symbol | |
ID | 5082949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 685502 |
End bp | 686647 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640482237 |
Product | benzoate transporter |
Protein accession | YP_001166890 |
Protein GI | 146276731 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
TIGRFAM ID | [TIGR00843] benzoate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0176509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCTTT CACTTCTTTC GGCGGCCGTG GTGGCCGCGC TCGTCGGCTA TGGCTCGACC ATCGCGCTGG TGCTGGCCGC CGCCGCGGCG GTCGGCGCAA GCGAGGCGCA GACGGCCAGC TGGGTGCTGG CCCTCTGCCT TGGCAAGGCC ATGGGCAGCG CGTTCCTGAG TTGGCAGAGC CGGGTTCCGG TGGTGCTGGC CTGGTCCACG CCCGGAGCGG CGCTGGTCGC CGCCAGCGAA GGGGTCACGA TGGCCGAGGC CGTGGGCGCC TTCGTTCTGG CCGGCGGGCT GATCGCGCTG ACCGGGGCGC TCCGCCCGCT CGGCCGGGCG GTGGCGCTGA TCCCCGACGG GATCGCGGCC GGAATGCTGG CGGGCGTGCT GCTGCCCTTC TGCCTCAAGC TGGCTGGCGC GGCCGAGGCG CTTCCGCTGC TGGTGCTGCC GGCGATCGCG GTCTTCGCGC TCGTGCGGCT CTGGAACCCG GCCTTTGCGG TGCTGGCCGC GCTTGCGGGC GGCAGCGCGC TGGCCTTTGC CGGAGAGGCC GCGCTGCCCG CGATCCCCCT CGCCTTGCCC ACGCTGGCCC TCATCGCGCC CGAGTTCGAT GCGGCGGCCC TGATCGGGCT TGGCCTGCCG CTCTATTTCG TGACGATGGC CTCGCAGAAC CTGCCGGGCT TTGCGGTGCT GCGCGCCGCG GGCTACGAGC CGCCGGTGCG CAGCGCCCTG ACGGTGACGG GCGGGCTTTC GGCCCTGATC GCGCCCTGCG GCGGCCATAC GATCTCGATG GCCGCGATCA CCGCGGCGAT CTGCCTGGGC GATGAGGTGC ACCCGGATCG CGGCCGCCGC TGGATCGTGG GCCTTGTCTA TGCCGGTGTC TGGTTGGCGC TTGGCCTTTT TGGGCCGGCG ATCCTCGCCT GCATCGCGGC CCTGCCGCCC GCACTGGTCG CCGCGCTGGT CGGGCTCGCG CTGCTCGGCC CGCTGACCGG GGCCATGACG GCGGCCTTCG CCGCGCCCGA ACAACGATTC GCGGCCGTGG TCACGCTGGC GGTTACGGGA TCGGGCGTGG CGATCCTGGG GATCGGCGGC GCCTTCTGGG GCCTTGCGGC CGGGCTGGCC GTTCACGCGA TGGAGCGGGC AGCGCGCCGG GCCTGA
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Protein sequence | MRLSLLSAAV VAALVGYGST IALVLAAAAA VGASEAQTAS WVLALCLGKA MGSAFLSWQS RVPVVLAWST PGAALVAASE GVTMAEAVGA FVLAGGLIAL TGALRPLGRA VALIPDGIAA GMLAGVLLPF CLKLAGAAEA LPLLVLPAIA VFALVRLWNP AFAVLAALAG GSALAFAGEA ALPAIPLALP TLALIAPEFD AAALIGLGLP LYFVTMASQN LPGFAVLRAA GYEPPVRSAL TVTGGLSALI APCGGHTISM AAITAAICLG DEVHPDRGRR WIVGLVYAGV WLALGLFGPA ILACIAALPP ALVAALVGLA LLGPLTGAMT AAFAAPEQRF AAVVTLAVTG SGVAILGIGG AFWGLAAGLA VHAMERAARR A
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