Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0671 |
Symbol | |
ID | 5082941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 674696 |
End bp | 675436 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640482229 |
Product | hypothetical protein |
Protein accession | YP_001166882 |
Protein GI | 146276723 |
COG category | [R] General function prediction only |
COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.435313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00362929 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCTGAGT ATCAGACGGT GCGTTCGGTC GGCGCAGGCG CCCGGGCGGC CAGGATCGAC GAGGGCCTGC GCGCCCACAT GAACAAGGTC TACGGGCTGA TGTCGGTCGG GATGCTGCTG ACCGGCGGCG TGGCCTGGGC CGTCGGGACC AGCGAGCAGC TCTTCTCGCT GCTGCGCGAC CCGGTGACGA TGAGCCCGAA CATCCTCGGC TGGATCGTGA TGTTTGCCCC GCTGGTGATG GTCTTCGCCT TCGGCGCGGT GCTGAACCGT CTGAGCCAGG CCGCTGCGCA ACTCTTCTTC TACGCCTATG CGGCCGTGAT GGGCCTGTCG CTGAGCTGGA TCTTCGTGGC CTTCACCGGC GTGTCGATCG CGCAGACTTT CCTGATCACC GCGATCGCCT TCGCGAGCCT CTCGCTCTTC GGCTACACGA CGAAGAAGGA CCTCTCGGGC TTCGGCACGT TCCTGATCAT GGGCGTGGTG GGCCTGATCG TGGCGATGAT CGTGAACATC TTCCTCGCCT CGTCGGCGCT GGCCTTCGCG ATCTCGGTGA TCGGCGTGCT GATCTTTGCC GGCCTCACCG CCTACGACAC GCAGAACATC AAGAACACCT ACCTGCAGCA CGCCCACAGC GGCGATGCCG AGTGGCTGGG CAAGGCCGCC ATCATGGGCG CGCTGCAGCT CTACCTCGAT TTCATCAACC TGTTCATGTT CCTGCTGCAG TTCATGGGCA ACCGCGAGTA A
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Protein sequence | MAEYQTVRSV GAGARAARID EGLRAHMNKV YGLMSVGMLL TGGVAWAVGT SEQLFSLLRD PVTMSPNILG WIVMFAPLVM VFAFGAVLNR LSQAAAQLFF YAYAAVMGLS LSWIFVAFTG VSIAQTFLIT AIAFASLSLF GYTTKKDLSG FGTFLIMGVV GLIVAMIVNI FLASSALAFA ISVIGVLIFA GLTAYDTQNI KNTYLQHAHS GDAEWLGKAA IMGALQLYLD FINLFMFLLQ FMGNRE
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