| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0668 |
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| Symbol | |
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| ID | 5082938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 671884 |
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| End bp | 673158 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640482226 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001166879 |
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| Protein GI | 146276720 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00457285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCGACG CAACCACAGA TCTCGCCGCC CCGACTCCCG GGCGCCTCAC GACGGCCGAT
GGCCGCCCGC TGAAGGCCGC ACTCGGCCGC GCCCAGTCCC GCGCACGGCG CCGCGCCTTC
CTTCTGGTGC TGCCGCTTCT GCTCTTCATC GTCATAACCT TCATCGTCCC GATCGGGCAG
ATGCTGCACC GCTCGATCCA CAATGACGGC TTCTCCCGCA ACATGCCGCA GCTCAGCCAG
TGGTTCGCCG ATACCGAACC CGGAACCGAG CCGGACGAGG TCGCCTATGC AGCCCTTGCC
GCCGATCTCA AGGGCGCGGC CGAGGCCAAG ACCATCGGCA TCGTGGGCAC GCGGGTGAAC
TACGAGATGC CGGGCACCCG CTCGCTCTTC ACCTCGACCG GCCGCAAGGC GCGCGGGTTC
GAGCCGCCCT ACAGGGAGGC CGTCCTCGAG GCGGATCCGA AATGGGGCAA CCCGAGTCTC
TGGGGCACGA TGCGACAGGT CTCGCAGGCC TATTCGCCGA ACTTCTTCCT CGCCTCGGTC
GATCTCGCCC GCGACAACGA GGGCAACATC GTGCGGGCCC CCCAGGAGCG CCGCGTGTAT
GTCATGCTCT TCCAGCGAAC CTTCCTGATC GCGGGCCTGA TCACGGTGCT CTGCCTGCTG
CTGGGCTTTC CGATCGCCCA CCTGCTCGCC ACGCTGCCCC TGCGCACCTC GAACCTGCTG
ATGATCCTGG TGCTCCTGCC CTTCTGGACC TCGCTTCTCG TGCGGACGAC GTCGTGGATC
GTGCTGCTGC AGGGCCAGGG GGTCGTCAAC AACTCCCTGG TGGCCACAGG CCTCATCTCC
GATGCGAACC GGATCCAGAT GATCTACAAC CAGACCGGCA CGATCATCGC CATGACGCAC
ATCCTGCTGC CCTTCATGAT CCTGCCGCTC TATTCCGTGA TGCGGCCGAT CCCGCCCTCC
TATGTCCGGG CCGCCCGCTC GCTCGGCGCC TCAAGCTGGA CGGCCTTCCG CCGGATCTAT
CTTCCCCAGA CCCTGCCGGG CATCGGCGCG GGCGCGCTGC TCGTCTTCAT CCTCGGCGTC
GGCTACTACA TCACCCCGGC GCTCGTGGGG GGCGCTTCGG GGCAGCTCAT CTCGAACCTG
ATCGCCTTCC ACATGCAGGA CAGCCTGAAC TGGTCGCTCG CCGCGGCCCT CGCCGCCGTG
CTGCTGGCCG CCGTGCTGAT CCTTTACTGG CTCTACGACC GTCTGGTCGG CATCGACAAT
CTCAAGCTGG GCTGA
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| Protein sequence | MADATTDLAA PTPGRLTTAD GRPLKAALGR AQSRARRRAF LLVLPLLLFI VITFIVPIGQ
MLHRSIHNDG FSRNMPQLSQ WFADTEPGTE PDEVAYAALA ADLKGAAEAK TIGIVGTRVN
YEMPGTRSLF TSTGRKARGF EPPYREAVLE ADPKWGNPSL WGTMRQVSQA YSPNFFLASV
DLARDNEGNI VRAPQERRVY VMLFQRTFLI AGLITVLCLL LGFPIAHLLA TLPLRTSNLL
MILVLLPFWT SLLVRTTSWI VLLQGQGVVN NSLVATGLIS DANRIQMIYN QTGTIIAMTH
ILLPFMILPL YSVMRPIPPS YVRAARSLGA SSWTAFRRIY LPQTLPGIGA GALLVFILGV
GYYITPALVG GASGQLISNL IAFHMQDSLN WSLAAALAAV LLAAVLILYW LYDRLVGIDN
LKLG
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