| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0667 |
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| Symbol | |
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| ID | 5083011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 670761 |
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| End bp | 671834 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640482225 |
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| Product | spermidine/putrescine-binding periplasmic protein-like protein |
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| Protein accession | YP_001166878 |
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| Protein GI | 146276719 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.872941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00848577 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAAGG CCCTCATTCT GTCCACCGCC TTGACGGCCG TGGCCTTCTC CGCCGCGGCG
GAGCAGATCA CGGTCATGTC CTGGGGCGGC GCCTATACGA CCAGCCAGGT CGAGGCGTTC
CACAAGCCCT TCACCGCCGA GACCGGCATC GGCGTGGTGT CGGTGGATGC GGACAACCCC
GCCACGCCGC TCAAGGCGAT GGTCGAGGCC AACAATGTCA GCGTCGATGT GGTGGATGTG
AACACCTCGG ACGCGGTTCG CCTGTGCGAC GAGGGCCAGC TCGAAGAGAT CGACCCGGCC
ATGCTGCCGC CCGCGCCCGA CGGCACTCCG GCGACCGAGG ACTTCCTGCC GGGCGCTCTC
AGCGAATGCG CCGTGGGCAA CATCGTCTAT TCCATGATCG TGGCCTACGA CGAGTCGAAA
TTTCCCGACG AGAAGCCGCA GACCATCGCC GACTTCTTCG ACACGTCGAA GTTCCCCGGC
AAGCGCGCCA TGTGGAAGAG CGCCAAGACC ACGCTCGAGA TGGCGCTGAT GGGCGATGGC
GTCCCGGCGG CCGAGGTCTA TGACGTGCTG GACACGCAGG AAGGCGTCGA GCGCGCCTTC
GCCAAGCTTG CCTCGATCAA GGGCGACCTG ATCTGGTGGG AGGCGGGCGC CCAGCCGGTC
CAGCTTCTGG CGGATGGCGA GGTGGCCATG ACGACCGCCT ACAACGGCCG GATCTTCGCG
GCCGCGGTCA GCGAGAACAA GCCCTTCGTG CCGATCTGGG ACGGTCAGGT CTATGAATAC
GACCTCTTCG TGATCCCGAA GGGCGCGCCC AACCTCGAGG CGGCGAAGAA GTTCGTGGCC
TTCGCAACCG GGACGCAGCC GCTGGCCGAC CAGGCCAAGT GGATCAGCTA CGGCCCGGCC
CGCAAGTCCT CGGCCCCGCT GGTCGGGCTC TATCAGGACG GCCAGACCGA GATGGCCCCG
CACATGCCGA CGGCCGAGGC GAACCTGACC AACGCGCTGC CCTCGTCCTA CGAGTTCTGG
GTCGATCACG ATACCGAGCT GGAAGAGCGG TTCAACGCCT GGCTGGCGAA CTGA
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| Protein sequence | MKKALILSTA LTAVAFSAAA EQITVMSWGG AYTTSQVEAF HKPFTAETGI GVVSVDADNP
ATPLKAMVEA NNVSVDVVDV NTSDAVRLCD EGQLEEIDPA MLPPAPDGTP ATEDFLPGAL
SECAVGNIVY SMIVAYDESK FPDEKPQTIA DFFDTSKFPG KRAMWKSAKT TLEMALMGDG
VPAAEVYDVL DTQEGVERAF AKLASIKGDL IWWEAGAQPV QLLADGEVAM TTAYNGRIFA
AAVSENKPFV PIWDGQVYEY DLFVIPKGAP NLEAAKKFVA FATGTQPLAD QAKWISYGPA
RKSSAPLVGL YQDGQTEMAP HMPTAEANLT NALPSSYEFW VDHDTELEER FNAWLAN
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