Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0666 |
Symbol | |
ID | 5083104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 669586 |
End bp | 670689 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640482224 |
Product | spermidine/putrescine ABC transporter ATPase subunit |
Protein accession | YP_001166877 |
Protein GI | 146276718 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0172946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGGCTT CTACCCAGGA CGACGGTTTC GTCGTTTTCG AACATGTGCA GAAAAGCTAC GACGGGGAGA CGCTGGTCGT TAAGGATCTC AACCTGACCA TAGGGCAGGG CGAGTTCCTC ACGATGCTGG GGCCCTCCGG GTCGGGCAAG ACCACCTGTC TCATGATGCT GGCGGGGTTC GAGACCGCCA CCCACGGCGA CATCCGGCTC GACGGGCGCC CGATCAACAC CGTGCCCCCG CACAAGCGCG GCATCGGAAT GGTGTTCCAG AACTACGCGC TCTTTCCCCA CATGACGGTC GGCGAGAACC TCTCGTTTCC GCTCGAGGTG CGGGGCATGT CGCGGAGCGA CCGCGAGCGC AAGATCAAGC GCGCGCTCGA CATGGTGCAG ATGGGCGCCT TTGCGAACCG CCGCCCGGCC CAGCTCTCGG GCGGCCAGCA GCAGCGGATC GCGCTGGCCC GCGCGCTGGT GTTCGACCCG CAGCTCGTGC TGATGGACGA GCCGCTCGGC GCGCTCGACA AGCAGCTGCG CGAGCACATG CAGTTCGAGA TCAAGCACCT GCACGAGAGC CTTGGCATCA CGGTGGTCTA TGTCACCCAC GACCAGGGCG AGGCGCTGAC CATGTCGGAC CGGATCGCCG TCTTCAACGA CGGCCGCATC CAGCAACTCG CCCCGCCCGA CGAGCTGTAC GAGCGCCCGC GGAACAGCTT CGTCGCCAGC TTCATCGGCG AGAACAACCG CCTGCCCGGC GTGATCGAGG AGATCGCCGA GGGCCGCGCG CTGGTCCGGC TCGACACCGG CGAGCTGATC GACGCAACTC CGGTCAACGT CAGCCACAAG GGCCAGAAGA CTCTCGTCTC GATCCGCCCC GAACGGGTGG AATACAAGCC CGAGATGCTG CCGCCGAACG CCCACCTCAT CGAGGCCGAG GTGATGGAGT TCATCTACAT GGGCGATATC TTCCGCACCC GCCTGCGGGT CGCCGGTTCC GAGGAGTTCG TCATCAAGAG CCGGAACACG CTGGGCCAGC GGATGCTGCA GCCCGGCGAA AGGATCCGGA TCGGCTGGGC GCCCCAGGAC GCGCGCGCGC TCGATCCGCT TTGA
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Protein sequence | MVASTQDDGF VVFEHVQKSY DGETLVVKDL NLTIGQGEFL TMLGPSGSGK TTCLMMLAGF ETATHGDIRL DGRPINTVPP HKRGIGMVFQ NYALFPHMTV GENLSFPLEV RGMSRSDRER KIKRALDMVQ MGAFANRRPA QLSGGQQQRI ALARALVFDP QLVLMDEPLG ALDKQLREHM QFEIKHLHES LGITVVYVTH DQGEALTMSD RIAVFNDGRI QQLAPPDELY ERPRNSFVAS FIGENNRLPG VIEEIAEGRA LVRLDTGELI DATPVNVSHK GQKTLVSIRP ERVEYKPEML PPNAHLIEAE VMEFIYMGDI FRTRLRVAGS EEFVIKSRNT LGQRMLQPGE RIRIGWAPQD ARALDPL
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