| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0665 |
|---|
| Symbol | lipB |
|---|
| ID | 5083009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 668301 |
|---|
| End bp | 668957 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640482222 |
|---|
| Product | lipoate-protein ligase B |
|---|
| Protein accession | YP_001166876 |
|---|
| Protein GI | 146276717 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0321] Lipoate-protein ligase B |
|---|
| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.119674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0262975 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACG TGGAATGGTC GGTTCTTCCG GGGCTCAGCC CCTACCAGGA AACGCTGTCG
GCGATGGAGG CCCGCGTCGC CGCCATCCGC GCCGGCGACG CCCCCGAGGC GGTCTGGCTG
CTCGAGCACC CCCCGCTCTA CACGGCCGGC ACCTCGGCAC GCCCCGAGGA TCTGGTCGAA
CCCGACCGCT TCCCCGTCCA TGTCGCGGGC CGCGGCGGGC AATACACCTA CCACGGGCCG
GGACAGCGGG TGGCCTATGT GATGCTCGAT CTCGACCGGA GGGGCCGTGA CGTGCGCCGC
TTCGTGTGCG CGCTCGAGGA TTGGGTGATC GCCACGCTGG CCGAGTTCAA TGTGAAGGGC
GAGCGGCGCG CGGGCCGTGT GGGGGTCTGG GTTGTCCGCC CCGACCGCGC CCCCGGCCCC
GACGGCCAGC CCCGAGAGGA CAAGATCGCG GCCATCGGCG TGAAGCTCCG CCGCTGGGTG
AGCTTTCACG GGCTCTCCAT CAACCTCGAG CCCGACCTGT CCCACTTCGA GGGCATCGTG
CCCTGCGGCA TCCGCGAGCA TGGCGTGACG AGCCTCGTCG ATCTGGGCCT GCCCGTCACG
ATGCAGGATC TCGACGCGGC CCTGCTGCGC ACCTTTTCCC GCTCCTTCCC GGACTGA
|
|---|
| Protein sequence | MSDVEWSVLP GLSPYQETLS AMEARVAAIR AGDAPEAVWL LEHPPLYTAG TSARPEDLVE
PDRFPVHVAG RGGQYTYHGP GQRVAYVMLD LDRRGRDVRR FVCALEDWVI ATLAEFNVKG
ERRAGRVGVW VVRPDRAPGP DGQPREDKIA AIGVKLRRWV SFHGLSINLE PDLSHFEGIV
PCGIREHGVT SLVDLGLPVT MQDLDAALLR TFSRSFPD
|
|---|
| |