| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0663 |
|---|
| Symbol | |
|---|
| ID | 5083007 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 665753 |
|---|
| End bp | 666262 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640482220 |
|---|
| Product | integral membrane protein-like protein |
|---|
| Protein accession | YP_001166874 |
|---|
| Protein GI | 146276715 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5488] Integral membrane protein |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.262552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.082047 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAAGG CCCCGGAGCG ATCCGGGGCC TTTTGCCATG CCGACGGGGA CGCTCCGGCC
TATCGGCTGC ACCTGTGGCC CTACCGCTCG CTGCCGCGGC GCGGCTTTGC GGGTTTCATC
GGGGCCACCT GCCTGCTGCT CGCGCTGCCG CTGGTGGGGG TGCTCGGCTC ACCCGTGCTC
TGGGGGCTGC TGCCGTTCCT GGCCTTGGCG GTCACGGGCA TCTGGCTTGC GCTGAACCGC
AGCTACGCCG ACGGAGAAAT CCTCGAGGAG CTGACGCTCT GGAGCGACCG GGTGACGCTC
GACCGGCACG GGCCGCGCGG ACGACGGCAG AACTGGCAGG CCAACCCGCA CTGGGTGCGG
GTGACGCTTC ACGGCAAGGG GGGCCCGGTG CCCAACTATC TGACGCTCGG CGGCGGCCCG
CGCGAGGTCG AGATCGGCGC CTTTCTCAGC GAGGAAGAGC GGCTGGCGCT GCTGCCCGAG
CTGCGTCAGG CGCTGGCCCG CGGGCGGTGA
|
|---|
| Protein sequence | MPKAPERSGA FCHADGDAPA YRLHLWPYRS LPRRGFAGFI GATCLLLALP LVGVLGSPVL
WGLLPFLALA VTGIWLALNR SYADGEILEE LTLWSDRVTL DRHGPRGRRQ NWQANPHWVR
VTLHGKGGPV PNYLTLGGGP REVEIGAFLS EEERLALLPE LRQALARGR
|
|---|
| |