| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0589 |
|---|
| Symbol | |
|---|
| ID | 5082894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 589638 |
|---|
| End bp | 591290 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640482144 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_001166800 |
|---|
| Protein GI | 146276641 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0760576 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGTGT CGTGGTTCGG ATCGTCCGCC TTTCGCGAAC GCGATGGGAC GGCGCCCCTC
TGGCTGGTGC TGATCCTGGT GCTGGCGGGC TACGCCCTGA TGGGCCGTAT CGGCACGGCA
ACGGCCATGC CGCCGACCGG CACCGTGGTG CTCTGGCCGG CGAACGCGGT CCTGCTCACG
GGACTTCTCT TCAGCAGCCC GCGACACTGG CCCTTCCTGC TGGCCGCGGG TCTCGCGGGC
GAAGTCATCG CCGGGTGGGA CACGCTCACC CTGCCCTGGG CGCTGGCCTT CGGCCTCGTC
AACGGCGTCG AGGCGACGCT CGCCGCCGCA CTTCTGCGTC GCCTCGCCAC CGGACCCCTA
CGGATCGACG GGCTGGCGGC CTTCGTCCGA TACGTTCTGG TCGCTCCGTT CGCGGCGTCG
GCGCTGGCCG CAACCGCAGG GGCACTGATC ATCAAGCTCC GCTTCCCCGA GATCGGCTAC
CTGCATTACT GGCGGGTCTT CTGGCTGGGC GACGCGCTCG GCCTGCTTCT GGTCGGGACC
ACCCTCCTCG TCTGGCTCGC CCCGCGCGAG CGACCGCGCA TGCCGCCGCG GTTGCGGCTG
CTCGAGGCCG TGGCGCTGTC AGCCTGCCTC ATCGCCGGCG CGGTCCTGTC GCTGCGCATC
GCGCACGATC TGGATCATCT CTATCTGCTT TTCCCGTTGC TGGTCTGGAC GGCCCTGCGC
TTCCGCATCG AGGGCGCGAC GCTCGCCGTC CTTGCGGTGA CGGCCATCGC GATCCGCGCC
ATGCTCGACG GGCTCGGCCC CTTCACGGAT CTGGCAGAAG TGGACCGGGT GACGGCGATG
CAACTGCTCA TCGCCGTCGT CGCGCTCTCG ACCTTCATAC TGGCGGTGTC CGCCGACGAG
CGGCGGCAGG TCACGCGGAA CCTGAAGCGT TCGGTCCGCG AACTCCAGCA GGCCCGCGCG
GATCTCGAGA GGATGAACGC CGATCTCGAC GGCATCGTGA CCGAGCGCAC CCGCGCGCTC
CGCAGCACGC TCGAGCGCAA CGAGATGCTG CTGCGTGAGG TGCACCACCG GGTGAAGAAC
AACCTCCAGC TGATCTCGAG CCTCGTGGCG CTGCAGCGGC GCGGCGTGAC AGAGCCCGCC
ATGCGCGAAC GGATGGTCCG CATCCAGGGC CAGATCGGCG CCATCGCCCG GACCTACGAC
CTGCTTCACC GGCTGGGGGC GAGCGAACAG GTGGATTTCG GGCCCTTCGT GCCCGCGCTG
TGCGAGGCCA TCGAGGAAAG CGAGGGCGGC CGGGCGCAGG TGACGCCCGA TCTTCAGGGC
AGCGCGGAGG TGACGGCCGA CAGCGCCATC GCCCTCTCGC TCGCCCTGAA CGAGCTGGTG
ACGAACGCGC TCAAGCACGG CGGGCCCGAG CCGGAGGTTC GGGTGAGCTG CCGCCGCGAG
AGGGGTGAAC TCGTGCTGAC GGTCGCGGAC GACGGGCCGG GCCTTGGCGA AGGATTCGAC
CTGATGGCGC AGCCCGGTTT TGGCGTGCGG ATGGTGGCAA GCCTGATCGG GCAGGTGAAT
GGAACGATCC GCACGCTGCC GGCGCAGCGC GGGGCGGCGA TCGAGATCCG CGTGCCGGCG
ATGGACGGCA CGGCGCCGCC CGGCACGCCC TGA
|
|---|
| Protein sequence | MAVSWFGSSA FRERDGTAPL WLVLILVLAG YALMGRIGTA TAMPPTGTVV LWPANAVLLT
GLLFSSPRHW PFLLAAGLAG EVIAGWDTLT LPWALAFGLV NGVEATLAAA LLRRLATGPL
RIDGLAAFVR YVLVAPFAAS ALAATAGALI IKLRFPEIGY LHYWRVFWLG DALGLLLVGT
TLLVWLAPRE RPRMPPRLRL LEAVALSACL IAGAVLSLRI AHDLDHLYLL FPLLVWTALR
FRIEGATLAV LAVTAIAIRA MLDGLGPFTD LAEVDRVTAM QLLIAVVALS TFILAVSADE
RRQVTRNLKR SVRELQQARA DLERMNADLD GIVTERTRAL RSTLERNEML LREVHHRVKN
NLQLISSLVA LQRRGVTEPA MRERMVRIQG QIGAIARTYD LLHRLGASEQ VDFGPFVPAL
CEAIEESEGG RAQVTPDLQG SAEVTADSAI ALSLALNELV TNALKHGGPE PEVRVSCRRE
RGELVLTVAD DGPGLGEGFD LMAQPGFGVR MVASLIGQVN GTIRTLPAQR GAAIEIRVPA
MDGTAPPGTP
|
|---|
| |