Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0577 |
Symbol | |
ID | 5082882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 579404 |
End bp | 580150 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640482132 |
Product | hypothetical protein |
Protein accession | YP_001166788 |
Protein GI | 146276629 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.236121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGCC ATTCCAAATG GGCGAACATC CAGCATCGCA AGGGCAAGCA GGACAAGCTG CGCTCGAAGA TGTTCTCGAA GCTGGCGAAG GAGATCACCG TCGCCGCCAA GATGGGTGAT CCCGACCCCG ACAAGAACCC GCGCCTGCGG CTGGCGGTGA AGGCGGCCAA GGCCGTCTCG ATGCCCAAGG ACGTGATCGA GCGCGCGATC AAGAAATCGC AGGGCGGCGA TGCCGAGGAT TATTCGGAAA TCCGCTACGA AGGCTATGGC CCGAACGGCA TCGCGATCAT CGTCGAGACG ATGACCGACA ACGTGAACCG CACCGCCTCG AACGTGCGCA GCTATTTCAC CAAGTTCGGC GGCAACCTCG GCACCACCGG CTCGGTGAGC TTCATGTTCG ACCGGGTGGG CGAGATCACC TACAAGCCCG CCGCCGGCGA TGCCGACACG GTGATGATGG CCGCGATCGA GGCCGGGGCC GATGACGTCG AATCGGACGA GGACGGCCAC TGGATCTATT GCGGCGACAC GAGCCTCAAC GAGGTGTCCG AGGCGCTGGA AAAGGTGCTG GGCGAGAGCG AGGAAGCCAA GCTCGTCTGG AAGCCGCAGA ACCGCACGAA CGTCGATCTG GAAACCGCGC AGAAGCTGAT GAAGCTGATC GATGCGCTGG AAGAGGACGA CGACGTGCAG ACGGTGACCG CAAACTTCGA CATCCCCGAG GATGTCGCGG CAAGGCTCGA CGCCTGA
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Protein sequence | MAGHSKWANI QHRKGKQDKL RSKMFSKLAK EITVAAKMGD PDPDKNPRLR LAVKAAKAVS MPKDVIERAI KKSQGGDAED YSEIRYEGYG PNGIAIIVET MTDNVNRTAS NVRSYFTKFG GNLGTTGSVS FMFDRVGEIT YKPAAGDADT VMMAAIEAGA DDVESDEDGH WIYCGDTSLN EVSEALEKVL GESEEAKLVW KPQNRTNVDL ETAQKLMKLI DALEEDDDVQ TVTANFDIPE DVAARLDA
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