Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0567 |
Symbol | |
ID | 5082872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 567874 |
End bp | 568755 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640482122 |
Product | trans-aconitate 2-methyltransferase |
Protein accession | YP_001166778 |
Protein GI | 146276619 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.445388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCG TCCGGTGGGC GGCGGCTCGA TCGCCGCCAT CCCCAAGACC CGGCCCAAGG TCATCAAGGC CGACGGCGGC CTCGAGCCCT CTGTCTGAGG TCAACGACAT AAGCGACTTG AACCCCGAAA CCTACGCCAG GTTTCGGGGT TTGCGTCTGA GGCCCGCGCT GGATCTTCTG GCCCGTATCC CGGCCTTGCC GATGGGCTGC GTGGTGGATC TTGGCTGTGG GGGTGGGGCG GTCGGACCGG CGCTGGCGTC GCGTTTCCCG GACCGGCGGC TTGTCGGGGT CGATGCTTCT CCCGCCATGA TGGCCGAGGC CGGGCAGTCA GGCGCCTACA GCGCACTCGT CAAGGCCGAC ATAGCCGAGT GGACGCCGGA CGAGGCGCCG GCCCTGATCT TCTCGAACGC GGCCCTCCAG TGGCTGGGCG ACCACGACCG GCTGATGCCG CGCCTTGCGG CCCTGCTTGC GCCCGGCGGC TCGCTTGCGG TGCAGATGCC CCGTCAGTAT GGCGCGCCCT CGCATCGGTT CCTGCGCGAC ATCGCGGCGG CCATGTTCCC CGACCGCTTC ACGCTCGAGG ATACCCATCC CGTCGCACCG GCGTCGCATT ACTGGGAGCT GCTCTGCCCC TTCGGCGAGG TGCAAGCCTG GGAGGCGGAG TTCGTCCAGC ACCTCGAGCC CACCCCCGGC GCGCATCCCG TCCGGCGTTT CACGGAATCG ACCGCAATGC GGCCCTTCCT CGCGCGGCTT GCGGCGGATG AGGCTTCGGC CTTCGTCGCG GCCTATGAAA GCGCGCTCGC GGCCGCCTAT CCCCTGCGGC CGGACGGCAG CGTGCTCTTT CCCTTCCGGC GCTGCTTCTT TGTGGTAACC CGTCCGGACT GA
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Protein sequence | MPIVRWAAAR SPPSPRPGPR SSRPTAASSP LSEVNDISDL NPETYARFRG LRLRPALDLL ARIPALPMGC VVDLGCGGGA VGPALASRFP DRRLVGVDAS PAMMAEAGQS GAYSALVKAD IAEWTPDEAP ALIFSNAALQ WLGDHDRLMP RLAALLAPGG SLAVQMPRQY GAPSHRFLRD IAAAMFPDRF TLEDTHPVAP ASHYWELLCP FGEVQAWEAE FVQHLEPTPG AHPVRRFTES TAMRPFLARL AADEASAFVA AYESALAAAY PLRPDGSVLF PFRRCFFVVT RPD
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