Gene Rsph17025_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0554 
Symbol 
ID5082822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp555442 
End bp556239 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content70% 
IMG OID640482109 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001166765 
Protein GI146276606 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGGC TGCATTGCAC CATCCTGGGC TGCGGCTCGT CGGGGGGTGT GCCGCGCCTG 
GGTGGGCTCT GGGGTGAGTG CGACCCGACC GACCCGAGGA ACCGCCGCCG CCGCTGCTCG
CTGCTGATCG AACGGGTCAC GGTGGACGGC ACGACGCGGG TGCTGATCGA CACGACGCCT
GACATGCATC CGCAGCTTCT GGATGCGGGC GTGGGGGAGC TGGACGCCGT GGCCTGGACC
CACGCCCATG CCGATCATGT CCACGGCATC GACGACCTGC GCCAGATCGT CTTCAACATG
CAGAAGCGCC TGCCGGTCTG GGCCGACGCC GATACGCAAC AGGCGCTGCT CACGCGCTTC
GGCTATGCCT TTGCGCAGCC CGAAGGCTCG CTCTACCCGC CGATCCTCGA CCTCAACACG
ATCGAGGGCC CGTTCGAGAT CACGGGCGCG GGCGGCACGG TCCGGCTCGA GCCCTTCCGC
GTCAGCCACG GGCCCACCGA GGCGCTCGGC TTTCGCGTCG GCGCCCTGGC CTATCTGCCG
GATGTGGTGG CCATCCCCGA AGAGGCCTGG CCCCGGCTCG AGGGACTCGA GATGTGGGTG
CTCGACGCGC TGCGCCGCAA GCCGCACCCG ACTCACGCGC ATCTCGCGCT GGCGTTGGAA
TGGATCGCGC GGGCGCGTCC CCGGCGGGCG ATCCTGACCA ACATGCATAT CGACCTCGAC
TATGCGACGC TGGCGGCGGA GCTTCCGGCG CATGTCGTGC CAGCCTACGA TGGGCTGACG
TTCGACCTCG CCGCATGA
 
Protein sequence
MARLHCTILG CGSSGGVPRL GGLWGECDPT DPRNRRRRCS LLIERVTVDG TTRVLIDTTP 
DMHPQLLDAG VGELDAVAWT HAHADHVHGI DDLRQIVFNM QKRLPVWADA DTQQALLTRF
GYAFAQPEGS LYPPILDLNT IEGPFEITGA GGTVRLEPFR VSHGPTEALG FRVGALAYLP
DVVAIPEEAW PRLEGLEMWV LDALRRKPHP THAHLALALE WIARARPRRA ILTNMHIDLD
YATLAAELPA HVVPAYDGLT FDLAA