| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0545 |
|---|
| Symbol | |
|---|
| ID | 5082813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 547443 |
|---|
| End bp | 548444 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640482100 |
|---|
| Product | methyltransferase small |
|---|
| Protein accession | YP_001166756 |
|---|
| Protein GI | 146276597 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATCTG CCCGCTTGAC ACTGGCGCTG GAAACCGGCG CGGTCGTGCT GCCCGACGCG
GGCAGCATCG TCGTCTATCG TCCGCGCGCG GCCGATGATC TGTCGGCGCT GCCGAAGGAC
CGGCTTCTGC TGGTGCAGGG CTTCCGGCCC GATCACGATG CGCTCGCGGC GCAGGGATAC
CGCGTGGCCG TGGCGGGCGG TTCGGGCCAT GCGGCCGCCG TCGTCTGCCT GCCGCGCGCG
CGAGCCGAGG CGCGGGCGCT GCTGGCCGAG GCCACCGCCG CGGTCGAGCC GGGCGGGCTC
ATCGTCGTGG ACGGGCAGAA GACCGACGGG ATCGAAGCGG TCTGGCGCGA TCTGGCCGAG
CGTCTGGCCG TGTCGGCGAC GCTCTCCAAG GCGCATGGCA AGCTCTTCAC CTTAGCGGCC
GAGCCGGGGC TCGAGGACTG GGCGGCGCGT CCGGCCGAGA TTGTGGGCGG TTTCCGCACC
CTTCCCGGCA TCTTCTCGGC CGATGCGCCC GACCGCGGCT CGCAGCTTCT GCTCGAGGCC
CTTCCGGCCG ATCTCTCGGG CCGGGTGGTG GATCTGGGCG CGGGCTGGGG CTTCCTCGCG
CGCGCGGTTC TCGGGCGGCG GGCCGTGAAG CGGATCGACC TGGTCGAGGC CGAGCATGCG
GCGCTGGATT GCGCGCGGCT GAACATCACT GACGAGCGCG CCCATTTCCA CTGGGCCGAC
GCCACGCGCT TCCGCCTGTC GAAACCGGCC GATGTGGTGG TCTGCAACCC GCCCTTCCAC
ACCACGCGCG AGGCCGATCC GACGCTCGGG ATGGGCTTCC TGCAGGCGGC GGCCCGGCTT
CTGGCCCCGT CCGGCTTGCT CTGGCTGGTG GCCAACCGGC ATCTGCCCTA TGACCGCGGT
CTCCGCGCCC TCTTCCGCGA GGTGGAGGAG ATCGGCGGCG ATGCCGCCTT CCGCATCGTC
CGTGCCGCGC GACCGCAACG CACGGCCGGC ACATCTGCAT AA
|
|---|
| Protein sequence | MRSARLTLAL ETGAVVLPDA GSIVVYRPRA ADDLSALPKD RLLLVQGFRP DHDALAAQGY
RVAVAGGSGH AAAVVCLPRA RAEARALLAE ATAAVEPGGL IVVDGQKTDG IEAVWRDLAE
RLAVSATLSK AHGKLFTLAA EPGLEDWAAR PAEIVGGFRT LPGIFSADAP DRGSQLLLEA
LPADLSGRVV DLGAGWGFLA RAVLGRRAVK RIDLVEAEHA ALDCARLNIT DERAHFHWAD
ATRFRLSKPA DVVVCNPPFH TTREADPTLG MGFLQAAARL LAPSGLLWLV ANRHLPYDRG
LRALFREVEE IGGDAAFRIV RAARPQRTAG TSA
|
|---|
| |