| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0526 |
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| Symbol | |
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| ID | 5082794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 526397 |
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| End bp | 528328 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640482081 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001166737 |
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| Protein GI | 146276578 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0241638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.268494 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGGAG TCGCGGCGCG CACGGCGCAG GGCAGGGTCG CAACCTCGAG ACTTCCCGAC
GTGCAGTCAT GGCTTCTGGG GGGGCTTGGC CTTCTGCTCG TCACGGCCGC GGCGCTTCCG
GTCCGCGCGC AGGAGGCTGA GACGATCATC CGCTCGCATG GCATCTCGAC CTTCGGCGAA
CTGAAATACC CGGCCGATTT CACGCATCTC GCCTATGTGA ACCCCGACGC GCCCAAGGGG
GGCGAGATCT CGGAATGGAC CTTCGGCGGG TTCGATTCGA TGAACCCCTA CTCGGTGAAG
GGCCGGGCCG CCGCGCTCTC GTCGATCATG TACGAATCGA TCCTCACCGG CACTGCCGAC
GAGATCGGCG CCTCCTATTG CCTGCTTTGC GAGACGCTGG AATATCCCGA GGATCGCAGC
TGGGTGATCT TCAACCTGCG CCCCGAGGCG AAGTTCTCGG ACGGAACGCC GGTGACGGCC
GAGGATGTGG TCTTTTCCTA CGAGACCTTC GTCACCAAGG GGCTGACCGA TTTCCGCACC
GTCTTTGCCC AGCAGGTCGA AAGCGCCGAG GCGCTCGACA GTCACCGGGT CAGGTTCACC
TTCAAGCCGG GCATCCCCAC CCGCGACCTG CCGCAGGACG TGGGCGGCCT GCCGGTCCTG
TCCAAGGCCC AGTACGAGCG CGAGGGGCTG GATCTGGAGG AGGGCAGCCT CAAGCCCTTC
CTCGGCTCGG GGCCCTATGT GCTCGACCGG ATGAACGTGG GCCAGACGGT CGTCTATCGC
CGCAATCCCG ACTACTGGGG CAATGATCTG CCGATCAACC GCGGGCGGGG CAATTTCGAC
ACGATCCGCA TTGAATATTA CGCCGATTAC AACGCGGCCT TCGAGGGCTT CAAGGGCGGC
AGCTACACCT TCCGCAACGA GGCCTCCTCG ATCCTCTGGG CCACGGGCTA CGACTTTCCT
TCGGTCGACG CAGGCCATGT GACGAAGGTC GAACTGCCCT CGGGCGCCAA GGCCACCGGG
CAGGGCTGGA TGATGAACCT GCGCCGCGAG AAGTTCCAGG ACCCCCGCGT GCGCGAGGCG
CTGGGCCTGA TGTTCAACTT CGAATGGTCC AACGCGACGC TGTTCTACGG CCTCTATACC
CGTGTCGATT CCTTCTGGGA AAACAGCTAC CTAGAGGCCG AGGGTTCGCC GTCCGAGGCC
GAGGTGGCGC TGATGAAGCC GCTGGTGGAC GAGGGGCTGC TGCCCGAGTC GATCCTGACG
GACCCTCCCG TCAGCCCCGC CGGATCGGGC GACCGGCAAC TCGACCGTGG CAACCTGCGC
GCGGCGAGCC GGCTTCTGGA CGAGGCCGGC TGGGCGGTGG GCGCCGACGG CCTGCGCCGC
AACGCCAGCG GCGAGGTGCT GCGGATCGAG TTCCTGAACG ACAGCCAGAC CTTCGACCGC
GTCATCAACC CGTTCATCGA GAACCTGCGG GCGCTCGGGA TCGACGCGCT GATGACGCGG
GTGGACAACG CCCAGATGGA AAGCCGCACC CGGCCTCCGA GCTACGATTT CGACATCACC
ACCGGGAACG CGCGCACGAA CTACATCTCC GGCTCGGAAC TCAAGCAGTA TTACGGGTCG
GAAACCGCCG ATGTCTCCAG CTTCAACATG ATGGGGCTCA AGAGCCCGGC GGTGGACCGG
ATGATCGAGA TGGTGCTGGC GGCCCATACC TCGGACGAGC TTGAGGTGGC GACCAAGGCG
CTGGATCGTG TGCTGCGGCT TCAGCGGTTC TGGGTGCCGC AATGGTACAA GGCCAGCCAC
ACCGTCGCCT ATTACGACAT GTACGAGCAT CCCGAGGAAC TTCCGCCCTA TGCGCTGGGA
GAGCTGGACT TCTGGTGGTT CAACCCCGAC AAGGCCGAGG CCTTGCGCGC GGCGGGCGCG
CTGAGACGCT AA
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| Protein sequence | MGGVAARTAQ GRVATSRLPD VQSWLLGGLG LLLVTAAALP VRAQEAETII RSHGISTFGE
LKYPADFTHL AYVNPDAPKG GEISEWTFGG FDSMNPYSVK GRAAALSSIM YESILTGTAD
EIGASYCLLC ETLEYPEDRS WVIFNLRPEA KFSDGTPVTA EDVVFSYETF VTKGLTDFRT
VFAQQVESAE ALDSHRVRFT FKPGIPTRDL PQDVGGLPVL SKAQYEREGL DLEEGSLKPF
LGSGPYVLDR MNVGQTVVYR RNPDYWGNDL PINRGRGNFD TIRIEYYADY NAAFEGFKGG
SYTFRNEASS ILWATGYDFP SVDAGHVTKV ELPSGAKATG QGWMMNLRRE KFQDPRVREA
LGLMFNFEWS NATLFYGLYT RVDSFWENSY LEAEGSPSEA EVALMKPLVD EGLLPESILT
DPPVSPAGSG DRQLDRGNLR AASRLLDEAG WAVGADGLRR NASGEVLRIE FLNDSQTFDR
VINPFIENLR ALGIDALMTR VDNAQMESRT RPPSYDFDIT TGNARTNYIS GSELKQYYGS
ETADVSSFNM MGLKSPAVDR MIEMVLAAHT SDELEVATKA LDRVLRLQRF WVPQWYKASH
TVAYYDMYEH PEELPPYALG ELDFWWFNPD KAEALRAAGA LRR
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