| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0524 |
|---|
| Symbol | |
|---|
| ID | 5082792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 524734 |
|---|
| End bp | 525567 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640482079 |
|---|
| Product | prephenate dehydratase |
|---|
| Protein accession | YP_001166735 |
|---|
| Protein GI | 146276576 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0077] Prephenate dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0734392 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.460167 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCC GAATCGCTTT CCAGGGGGAA CCCGGAGCCT ATTCGCACCA GGCCTGCCGG
CAGGCCCGGC CCGGGATGGA GGCCGTCCCC TGCCGCACCT TCGAGGATGC GATCGAGATG
GTCCGCGCGG GCGAGGCCGA TCTGGCGATG CTGCCGGTCG AGAACTCGAC CTACGGCCGG
GTCGCCGACA TCCACACGCT GCTGCCGGGC TCTGGCCTGC GGATCGTGGA CGAGGCGTTC
GTGCGGGTCC ATATCAACCT GCTGGCGGTG CGCGGCACGC CCGTCGGGCG GATCGAGCGC
GCCATGAGCC ATACGGTGCT GCTGGGCCAG TGCCGGACCT TCCTGCGCGA CCACGGGCTG
CGCCCGGTGA CCGGCGCCGA CACGGCAGGT TCCGCGCGGC TGGTGGCCGA GAAGAACGAC
CCCGCGCTCG CGGCCCTCGC CTCCGAGCTT GCGGGCGAGA TCTATGGCCT CGACGTGGTC
GCGCGCCACA TCGAGGACCA GTCCAACAAC ACCACCCGCT TCCTCGTCAT GTCGCGCGAG
GCCGACTGGA GCCGGCGCGG CCCCGGCAAG ATGGTCACGA CCTTCACCTT CCGCGTGCGC
AACATCCCGG CCGCGCTCTA CAAGGCGCTC GGCGGCTTTG CCACCAACGG GGTGAACATG
ACCAAGCTCG AGAGCTACAT GGTCGGCGGA TCCTTCACGG CGACGGAGTT CTACGCCGAC
ATCGAAGGCC ATCCCGAGGA TGCGAACGTG GCGCTTGCGC TCGAGGAGTT GCGCTTCTTC
ACCAGCCAGT CCGAAATCCT CGGCGTCTAT CCCGCCGATC CGGGGCGGGG CTGA
|
|---|
| Protein sequence | MTGRIAFQGE PGAYSHQACR QARPGMEAVP CRTFEDAIEM VRAGEADLAM LPVENSTYGR
VADIHTLLPG SGLRIVDEAF VRVHINLLAV RGTPVGRIER AMSHTVLLGQ CRTFLRDHGL
RPVTGADTAG SARLVAEKND PALAALASEL AGEIYGLDVV ARHIEDQSNN TTRFLVMSRE
ADWSRRGPGK MVTTFTFRVR NIPAALYKAL GGFATNGVNM TKLESYMVGG SFTATEFYAD
IEGHPEDANV ALALEELRFF TSQSEILGVY PADPGRG
|
|---|
| |