Gene Rsph17025_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0517 
Symbol 
ID5082711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp517792 
End bp518553 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID640482071 
Producthypothetical protein 
Protein accessionYP_001166728 
Protein GI146276569 
COG category[S] Function unknown 
COG ID[COG3820] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0545952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.117573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGC CGCTGATGTC CAAGGCCACC GCGGTCTGGC TGATCGACAA CACCACTCTC 
TCGTTCAGGC AGATCGCGGA CTTCTGCGGC ATGCACGAAC TCGAGGTGCA GGGCATCGCC
GACGGGGATG TGGCGACCGG GGTCAAGGGC TTCGACCCGG TGGCCAACAA CCAGCTCGAC
CAGATCGAGA TCCAGAAGGG CGAGAAGGAC CCGCTCTACC GGCTGAAGCT GAAGTTCAAC
CCCGCCGCGG TGGGCGAGGA GAAGCGCCGC GGCCCGCGCT ACACGCCGCT CTCCAAGCGG
CAGGACCGGC CGGCGGCGAT CCTGTGGCTT GTCAAGTTCC ACCCCGAGCT TTCGGACGGC
GCCATCGCCA AGCTTGTCGG CACCACCAAG CCCACCATCC AGTCGATCCG TGAGCGGACG
CACTGGAACA TCGGCTCGAT CCAGCCGATC GACCCGGTGG CACTGGGTCT CTGCCGCCAG
ACCGAGCTTG ACACGGCCGT GCAGCAGGCG GCCCGCCGCA AGGCCGCCGA GGGCGTGGTG
ATGAGCGATG ACGAGCGCCG CAAGCTCGTC TCGACCGAGC AGTCGCTCTC GATGCCGGAC
GAGCCGCGGA TGCCCTCGGG CCTGGCGGGG CTCGAGCAGT TCGGGCGCCC CGAAGAAGAA
AAGCGGCCCG CGGATTTCTC GGACGCCGAC TCCTTCTTCA ATCTGCCGCA CGGCGATGAT
GCGGACGAGG ACGAGGACGA GGACGAGGAT CCCCGCCGCT GA
 
Protein sequence
MNKPLMSKAT AVWLIDNTTL SFRQIADFCG MHELEVQGIA DGDVATGVKG FDPVANNQLD 
QIEIQKGEKD PLYRLKLKFN PAAVGEEKRR GPRYTPLSKR QDRPAAILWL VKFHPELSDG
AIAKLVGTTK PTIQSIRERT HWNIGSIQPI DPVALGLCRQ TELDTAVQQA ARRKAAEGVV
MSDDERRKLV STEQSLSMPD EPRMPSGLAG LEQFGRPEEE KRPADFSDAD SFFNLPHGDD
ADEDEDEDED PRR