Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0516 |
Symbol | |
ID | 5082710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 517050 |
End bp | 517670 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640482070 |
Product | ribonuclease T2 |
Protein accession | YP_001166727 |
Protein GI | 146276568 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG3719] Ribonuclease I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.13199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.104349 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATCC TGGCTGTCAT GCTCGCACTG GGCGCGGCAC CGGCCCTTGC CGATCACGAC CGGGCGGGCG ACTTCACCCA CTACATCCTC GCCCTCAGCT GGGAGCCGAC CTGGTGTGCG CTGGAAGGCG AGGCCCGCGG AGCCGAGGAA TGCAGCTGGG GCCGCGGCTT CGTGCAGCAT GGCCTCTGGC CGCAGCGCGA GGAAGGCTGG CCGGCCTATT GCCTCACGGT GGAGCGCGAC CCCTCGCGGC GCGAGACGAA TGCCATGTCC GACCTGATGT CGCCGGGCCT CGCCTGGCAC CAGTGGAAGA AGCATGGCCG CTGCGCGGAT CTGCCGCCGA CGGACTATTT CGCCCTCATG CGCGCGGCCT TCGCCCGCGT CACCGTGCCC GAGCCGCTGC GACGGCTGGA GGAGGACATC TCGCTGCCGC CGCGCGTGCT CGAGGAGGCT TTCACCGAGG CCAACCCGGG GCTGATGCCC GACGGGATCA CGATCACCTG CGAAGGCGGC CATGTGCAGG AGGTGCGGAT CTGCCTGACG AAGGACCTCG CGTTCCGTGA CTGCGCGCCG GACACGCGGA GGGACTGCCG TCTGCCGGTT GCGATGATGG ACCGGCCGTA G
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Protein sequence | MRILAVMLAL GAAPALADHD RAGDFTHYIL ALSWEPTWCA LEGEARGAEE CSWGRGFVQH GLWPQREEGW PAYCLTVERD PSRRETNAMS DLMSPGLAWH QWKKHGRCAD LPPTDYFALM RAAFARVTVP EPLRRLEEDI SLPPRVLEEA FTEANPGLMP DGITITCEGG HVQEVRICLT KDLAFRDCAP DTRRDCRLPV AMMDRP
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