Gene Rsph17025_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0516 
Symbol 
ID5082710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp517050 
End bp517670 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content70% 
IMG OID640482070 
Productribonuclease T2 
Protein accessionYP_001166727 
Protein GI146276568 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG3719] Ribonuclease I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.13199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.104349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCC TGGCTGTCAT GCTCGCACTG GGCGCGGCAC CGGCCCTTGC CGATCACGAC 
CGGGCGGGCG ACTTCACCCA CTACATCCTC GCCCTCAGCT GGGAGCCGAC CTGGTGTGCG
CTGGAAGGCG AGGCCCGCGG AGCCGAGGAA TGCAGCTGGG GCCGCGGCTT CGTGCAGCAT
GGCCTCTGGC CGCAGCGCGA GGAAGGCTGG CCGGCCTATT GCCTCACGGT GGAGCGCGAC
CCCTCGCGGC GCGAGACGAA TGCCATGTCC GACCTGATGT CGCCGGGCCT CGCCTGGCAC
CAGTGGAAGA AGCATGGCCG CTGCGCGGAT CTGCCGCCGA CGGACTATTT CGCCCTCATG
CGCGCGGCCT TCGCCCGCGT CACCGTGCCC GAGCCGCTGC GACGGCTGGA GGAGGACATC
TCGCTGCCGC CGCGCGTGCT CGAGGAGGCT TTCACCGAGG CCAACCCGGG GCTGATGCCC
GACGGGATCA CGATCACCTG CGAAGGCGGC CATGTGCAGG AGGTGCGGAT CTGCCTGACG
AAGGACCTCG CGTTCCGTGA CTGCGCGCCG GACACGCGGA GGGACTGCCG TCTGCCGGTT
GCGATGATGG ACCGGCCGTA G
 
Protein sequence
MRILAVMLAL GAAPALADHD RAGDFTHYIL ALSWEPTWCA LEGEARGAEE CSWGRGFVQH 
GLWPQREEGW PAYCLTVERD PSRRETNAMS DLMSPGLAWH QWKKHGRCAD LPPTDYFALM
RAAFARVTVP EPLRRLEEDI SLPPRVLEEA FTEANPGLMP DGITITCEGG HVQEVRICLT
KDLAFRDCAP DTRRDCRLPV AMMDRP