Gene Rsph17025_0499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0499 
SymbolileS 
ID5082858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp494093 
End bp497026 
Gene Length2934 bp 
Protein Length977 aa 
Translation table11 
GC content68% 
IMG OID640482053 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001166710 
Protein GI146276551 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.241069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCG ACACGACCAC CGTCCCCGAC TACAAGGACA CCGTCTTCCT GCCCGAGACC 
GACTTCCCGA TGCGCGCGGG CCTGCCCCAG CGCGAGCCGG AATGGCTGGC GCGCTGGGAA
CAGATCGGGA TCTACGACCG CCTGCGCGAG AAGACCGGCC GCAAGCCCTT CACGCTGCAC
GACGGCCCTC CCTACGCCAA CGGGCACCTG CATATCGGGC ACGCGCTGAA CAAGACGATC
AAGGACATGA TCGTGCGCTC GCATCAGATG ATGGGCTTTG ACGCGCGCTA TGTGCCGGGC
TGGGACTGCC ACGGGCTGCC GATCGAATGG AAGATCGAGG AGCAGTATCG CGCCAAGGGG
CTGAACAAGG ACGATGTGGA TGTGGTGGCC TTCCGGCAGG AGTGCCGGAA GTTCGCCGAG
GGCTGGGTGC AGATCCAGCG CGAGGAGTTC AAGCGGCTGG GTGTCACCGG CAACTGGGCC
GACCCCTACC TGACGATGGA CTTCCATGCC GAGGCGGTCA TCGCCGAGGA ATTCATGAAG
TTCCTGATGA ACGGCACGCT CTATCAGGGC TCCAAGCCCG TGATGTGGAG CCCGGTCGAG
AAGACCGCAC TGGCCGAGGC CGAGGTCGAA TATCACGACC ATACCTCGCA CCAGATCTGG
GTGAAGTTCC CGGTCGTGGC GGCGGGCGCC TTCCCCGAGG CCGAAGCCTG CCTGCAGACC
GAGGCGCTGG CGGCCTCGGT CGTGATCTGG ACCACGACGC CCTGGACCAT TCCGCAGAAC
CGCGCCGTGG CCTTCAACCG CGAGATCGCC TACGGCCTCT ACCGCATCGA GGCGGTGGCC
GAGAATGCCA CCTCGAAGGT GGGCGAGACG GTGATCGTGG CCGACAAGCT GTCGGAGGGC
ATCTTCAAGT CGGCCCGGAT CGAGGTCGCC ACGCGGCTGC GCGCCGTCTC GTCCGACGAG
CTGCAGGGCT TCGTGCTGGC CCATCCGTTC CGGGGCCTCG AAGGCTCGGC GGGCGAATGG
GACTTCGACG TGCCGATGCT GCCGGGCGAG CATGTCACCG ACGATGCGGG AACGGGCTTC
GTCCATACCG CGCCCTCGCA CGGCGACGAC GACTATCAAC TGGGCCTGAA GTTCGGCCTG
CCCATGACCT ACAACGTGCT CGAGGACGGC TCCTACCGGG CGGACCTGCC GCTCTTCGGC
GGGCAGGTCA TCATCACGCC CGAGGGCAAG GAAGGCCCCG CCAACGTCGA GGTCATCAAG
GCGCTGGCCC GCGCGGGTGC GCTCTTCGCC AAGGGCAAGC TCAAGCATTC CTACCCGCAT
TCCTGGCGCT CGAAGGCGCC GCTGATCTAC CGCAACACGC CGCAATGGTT CGTGGCCATC
GACCATCCGC TCGACGACGG GATGGGCGAG CATGGCGACA CGATCCGCAA GCGCGCGCTC
CGCTCGATCG AGGAGCTGGT GAAGTTCACG CCGATCTCGG GCCGCAACCG CCTCCATTCC
ATGATGGAGA CGCGGCCGGA CTGGGTGCTG AGCCGCCAGC GCGCCTGGGG CGTGCCGCTC
ACCTGCTTCG TGAAGAAGGG GGCGAAGCCC ACCGACCCGG ATTTCCTGCT GAAGGACCCG
GCCGTCAACG CCCGCATCTC CGCCGCCTTC GAGGCCGAGG GCGCGGACGT CTGGTATCGC
GAGGGCTTCA AGGCCCAAGT GCTGGGCGGG CTCCACGATC CCGAGGCCTA TGAGCAGATC
TTCGACGTGC TCGACGTCTG GTTCGACAGC GGCTCGACCC ATGCCTTCGT GCTGCGCGAC
CGGCCCGACG GCACCGAGGA CGGCATCGCC GACGTCTATA TGGAGGGCAC CGACCAGCAC
CGCGGCTGGT TCCACTCCTC GATGCTGCAG GCCTGCGGCA CCAAGGGGCG CGCGCCCTAC
CGGGGTGTCG TGACCCACGG CTTCACGCTG GACGAGAAGG GCATGAAGAT GTCCAAGTCG
CTCGGCAACA CCGTGGTCCC GCAGGAGGTG ATCGACCAGT ATGGCGCCGA CATCCTGCGG
CTCTGGGTGG CGCAGGCCGA TTTCACGGTC GATCAGCGCA TCGGCAAGGA GATCCTGAAG
GGCACCGCCG ACAGCTACCG CCGCCTGCGC AACACGCTGC GCTACATGCT GGGCGCGCTC
TCGGGCTTCT CCGAGGCCGA GCGCGTGGCC CCCGCCGACA TGCCCGAGCT GGAACGCTGG
GTGCTGCACC GGCTGGCCGA ACTCGATACC GAGGTGCGGC GCGGCTATGC CGCGTACGAC
TTCCAGGGCG TGTTCCAGAA GCTCTTCACC TTCTGCACCA GCGACCTCTC GGCCTTCTAC
TTCGACATCC GCAAGGATGC GCTCTATTGC GACGCGGCCA CCAGCCTCCG CCGCCGCTCG
GCGCGCACGG TGATGGACCT GCTGTTCCAC CGGCTGACCA CCTGGTTCGC GCCGATCCTC
GTCTTCACGA TGGAGGATGT CTGGCTTTCG CGCTTCCCCG GTGCGGACAG CTCGATCCAC
CTGCAGGACA TGCCGGACAC GCCCGCCGAC TGGCGCGACG AGCCGCTGGC TGCGAAGTGG
GCCACACTGC GGCAGGTGCG GCGCGTGGTG ACGGCCGCGC TCGAGGTGCA GCGGACGGCC
AAGGTGATCG GGGCCAGCCT CGAGGCCGCG CCGGTCGTCC ATGTGCGCGA GCCCGAGGTG
CTGTCGGCGC TGAAGTCGGT CGATTTCGCC GAGGTCTGCA TCACGTCCGA CCTGGCGCTG
ACCGGCGATC CGATGCCGGC CGAGGCCTTC CGCCTGCCCG AGGTTCAGGG CGTGGGCGTG
GTCTTCGAGC GCGCCGAGGG CGCCAAGTGC GAGCGGTGCT GGCAGTATCT GCCGGACGTG
GGCACTCACA GGCATCCGGG CACCTGCGCC CGCTGCAACG AGGTCCTTGG CTGA
 
Protein sequence
MSADTTTVPD YKDTVFLPET DFPMRAGLPQ REPEWLARWE QIGIYDRLRE KTGRKPFTLH 
DGPPYANGHL HIGHALNKTI KDMIVRSHQM MGFDARYVPG WDCHGLPIEW KIEEQYRAKG
LNKDDVDVVA FRQECRKFAE GWVQIQREEF KRLGVTGNWA DPYLTMDFHA EAVIAEEFMK
FLMNGTLYQG SKPVMWSPVE KTALAEAEVE YHDHTSHQIW VKFPVVAAGA FPEAEACLQT
EALAASVVIW TTTPWTIPQN RAVAFNREIA YGLYRIEAVA ENATSKVGET VIVADKLSEG
IFKSARIEVA TRLRAVSSDE LQGFVLAHPF RGLEGSAGEW DFDVPMLPGE HVTDDAGTGF
VHTAPSHGDD DYQLGLKFGL PMTYNVLEDG SYRADLPLFG GQVIITPEGK EGPANVEVIK
ALARAGALFA KGKLKHSYPH SWRSKAPLIY RNTPQWFVAI DHPLDDGMGE HGDTIRKRAL
RSIEELVKFT PISGRNRLHS MMETRPDWVL SRQRAWGVPL TCFVKKGAKP TDPDFLLKDP
AVNARISAAF EAEGADVWYR EGFKAQVLGG LHDPEAYEQI FDVLDVWFDS GSTHAFVLRD
RPDGTEDGIA DVYMEGTDQH RGWFHSSMLQ ACGTKGRAPY RGVVTHGFTL DEKGMKMSKS
LGNTVVPQEV IDQYGADILR LWVAQADFTV DQRIGKEILK GTADSYRRLR NTLRYMLGAL
SGFSEAERVA PADMPELERW VLHRLAELDT EVRRGYAAYD FQGVFQKLFT FCTSDLSAFY
FDIRKDALYC DAATSLRRRS ARTVMDLLFH RLTTWFAPIL VFTMEDVWLS RFPGADSSIH
LQDMPDTPAD WRDEPLAAKW ATLRQVRRVV TAALEVQRTA KVIGASLEAA PVVHVREPEV
LSALKSVDFA EVCITSDLAL TGDPMPAEAF RLPEVQGVGV VFERAEGAKC ERCWQYLPDV
GTHRHPGTCA RCNEVLG