Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0497 |
Symbol | |
ID | 5082856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 492347 |
End bp | 493045 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640482051 |
Product | phosphatidylcholine synthase |
Protein accession | YP_001166708 |
Protein GI | 146276549 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1183] Phosphatidylserine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.186684 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.666159 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCAC GCCTCAAAGC CCTGTCCGTT CACCTGCTGA CCGCCACGGG GGCCGTGCTC TCGATGCTCG CCATGCTGGC GGCGGTCGAG GAAGAGTGGA GCCTGATGTT CCTCTGGCTC GTCGTGGCGT TGTTCGTGGA CGGGATCGAT GGTCCGCTCG CCCGCCGCTA TGACGTCAAG ACCAACTGGC CGACCTACGA CGGCGTGGTG CTGGATCTCA TCATCGACTA TCTCACCTAT GTCTTCATCC CCGCCTATGC GCTCTTCAAG TCGGGGCTGC TGACGGGATG GACGGGTTGG CTGGTCATCA TCGTGATCGT CTATGGCTCG GCGATCTATT TCGTCGATAC CCGCATGAAG ACCAAGGATT ATTCCTTTGC GGGCTTTCCC GCCTGCTGGA ACATGGTGGT GCTCGTGCTC TTCGCCATCT CGCCGGGAGA ATGGACGATC CTCGGGATCG TGCTGGCGCT GACGCTCGCC ATGTTCACCA ACCTCAAGTT CATCCATCCG GTGCGGACGG CGCGCTGGCG CATGGTCTCG CTGCCGGTCG CGGCGGCCTG GGTCTTCTTC GCCGCGTGGG CCGCCTGGGT CGAGTTCAAC GAGGAAAGCT GGGCGCACTG GGGCCTCGTC GTGACCTCGG TCTATCTCGT GCTCGCGGGC GTGGCGCAGC AGATCATCCC GTCCCGCGCG AAGGCCTGA
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Protein sequence | MNARLKALSV HLLTATGAVL SMLAMLAAVE EEWSLMFLWL VVALFVDGID GPLARRYDVK TNWPTYDGVV LDLIIDYLTY VFIPAYALFK SGLLTGWTGW LVIIVIVYGS AIYFVDTRMK TKDYSFAGFP ACWNMVVLVL FAISPGEWTI LGIVLALTLA MFTNLKFIHP VRTARWRMVS LPVAAAWVFF AAWAAWVEFN EESWAHWGLV VTSVYLVLAG VAQQIIPSRA KA
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