Gene Rsph17025_0497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0497 
Symbol 
ID5082856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp492347 
End bp493045 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content63% 
IMG OID640482051 
Productphosphatidylcholine synthase 
Protein accessionYP_001166708 
Protein GI146276549 
COG category[I] Lipid transport and metabolism 
COG ID[COG1183] Phosphatidylserine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.186684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.666159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAC GCCTCAAAGC CCTGTCCGTT CACCTGCTGA CCGCCACGGG GGCCGTGCTC 
TCGATGCTCG CCATGCTGGC GGCGGTCGAG GAAGAGTGGA GCCTGATGTT CCTCTGGCTC
GTCGTGGCGT TGTTCGTGGA CGGGATCGAT GGTCCGCTCG CCCGCCGCTA TGACGTCAAG
ACCAACTGGC CGACCTACGA CGGCGTGGTG CTGGATCTCA TCATCGACTA TCTCACCTAT
GTCTTCATCC CCGCCTATGC GCTCTTCAAG TCGGGGCTGC TGACGGGATG GACGGGTTGG
CTGGTCATCA TCGTGATCGT CTATGGCTCG GCGATCTATT TCGTCGATAC CCGCATGAAG
ACCAAGGATT ATTCCTTTGC GGGCTTTCCC GCCTGCTGGA ACATGGTGGT GCTCGTGCTC
TTCGCCATCT CGCCGGGAGA ATGGACGATC CTCGGGATCG TGCTGGCGCT GACGCTCGCC
ATGTTCACCA ACCTCAAGTT CATCCATCCG GTGCGGACGG CGCGCTGGCG CATGGTCTCG
CTGCCGGTCG CGGCGGCCTG GGTCTTCTTC GCCGCGTGGG CCGCCTGGGT CGAGTTCAAC
GAGGAAAGCT GGGCGCACTG GGGCCTCGTC GTGACCTCGG TCTATCTCGT GCTCGCGGGC
GTGGCGCAGC AGATCATCCC GTCCCGCGCG AAGGCCTGA
 
Protein sequence
MNARLKALSV HLLTATGAVL SMLAMLAAVE EEWSLMFLWL VVALFVDGID GPLARRYDVK 
TNWPTYDGVV LDLIIDYLTY VFIPAYALFK SGLLTGWTGW LVIIVIVYGS AIYFVDTRMK
TKDYSFAGFP ACWNMVVLVL FAISPGEWTI LGIVLALTLA MFTNLKFIHP VRTARWRMVS
LPVAAAWVFF AAWAAWVEFN EESWAHWGLV VTSVYLVLAG VAQQIIPSRA KA