| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0476 |
|---|
| Symbol | |
|---|
| ID | 5082835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 473540 |
|---|
| End bp | 474442 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640482029 |
|---|
| Product | IS30 family transposase |
|---|
| Protein accession | YP_001166687 |
|---|
| Protein GI | 146276528 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.15798 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCCA CACATTTGGC CCCTTCTGCA CCCCGGACGC TGGGCCGCAG CCTTTCCTTT
GCCGAGCGTG AGGAAATCGC TCTGGAGTGC GCGCGGAAGA CCGGGGTGCG CGCCATCGCC
CGGAAGCTGG GGCGTTCGCC GAGCACGATC TCACGCGAGA TCAGGCGCAA CTCCGCGACC
CGTGGCGGGG ATTTCGATTG CCGCGCCATC ACCGCGCAGT GGCATGCGGA CCGTGCAGCC
CAACGACCTA AGACCAGCAA GCTCGCGAAC AATCCGGCCC TGCGTGACTA CGAGCAGGAC
CGGCTCGCGG GTGTGATCGC CACGCCGGAC GGCGTCGCCT TCGACGGGCC TGTCGTGGTA
TGGAAGAAGC GGCGGGCGGT TCACCGGCAA AGCCGACGAT GGTCCTTGGC ATGGAGCCCG
GAACAGATCG CGCAGCGATT GAAGATGGAC TTTCCCGAGG ACCCGACCAT GCGCATCAGC
CACGAAGCGA TCTATCAGGC GCTCTACATT CAGGGGCGTG GCGCGCTGAA GCGGGAGCTT
TCCGCCTGCC TGCGCTCGGG CCGAGCGCTA CGTCTCCCCC GGGAGCGCGC CCGAAACCGA
GGCAAGGCTT TTGTCGGGGA TGCATTGATG ATCAGCGATC GCCCGGCGGA AGTGGGCGAC
AGGGAGGTGC CGGGCCACTG GGAGGGAGAT CTCATCCTTG GCCTCGGCAG TTCGGCAATC
GGCACCCTGG TCGAACGGAC CACGCGCTTC ACGATGTTGC TGCATCTGCC GCGGATGGAG
GGCCATGGAG CGACCAGGTC CATCAAGAAT GGACCGGCTC TTGCCGGTCA TGGTGCCGAA
GCCGTTCGCG ATGCAATTGC AGACACCATC ATGGACCTGC CCGCACAAGC GGCTGAGACC
TGA
|
|---|
| Protein sequence | MPPTHLAPSA PRTLGRSLSF AEREEIALEC ARKTGVRAIA RKLGRSPSTI SREIRRNSAT
RGGDFDCRAI TAQWHADRAA QRPKTSKLAN NPALRDYEQD RLAGVIATPD GVAFDGPVVV
WKKRRAVHRQ SRRWSLAWSP EQIAQRLKMD FPEDPTMRIS HEAIYQALYI QGRGALKREL
SACLRSGRAL RLPRERARNR GKAFVGDALM ISDRPAEVGD REVPGHWEGD LILGLGSSAI
GTLVERTTRF TMLLHLPRME GHGATRSIKN GPALAGHGAE AVRDAIADTI MDLPAQAAET
|
|---|
| |