| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0469 |
|---|
| Symbol | |
|---|
| ID | 5082828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 464909 |
|---|
| End bp | 467701 |
|---|
| Gene Length | 2793 bp |
|---|
| Protein Length | 930 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640482022 |
|---|
| Product | PII uridylyl-transferase |
|---|
| Protein accession | YP_001166680 |
|---|
| Protein GI | 146276521 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2844] UTP:GlnB (protein PII) uridylyltransferase |
|---|
| TIGRFAM ID | [TIGR01693] [Protein-PII] uridylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0882544 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCCGG CTTCTGAGCC CGGCGCTTCG CAGGATCCGC TCTTTTCCGG GCTGATCCTG
CCCCGCTCCC GCATCATCGA CCCCGAGGCG CTGACGCGCA GCATCCTCGC CGAGATCGAT
GCGGTGTCTC CCACCGACCC GAAGGCCGCC CGCGCCATCG CCGTCCGCCA GATGACGGAG
GCGAAGGCGG CGGGCAACCG CGCCCTTTCC GAGACCTTCG AGGCCCGCCC GCGCGAGGCC
CGCGGCCTGA TCCGCGCCCA GGCCGTGTTG ACCGACGGGC TGGTCACCAC CGCCCTCCGC
GTCGCCTGCG AGCGGCTTCA TCCGCTGCCA AACCCGACCG AGGCGGAGCG CGTGGCCGTC
CTTGCCGTCG GCGGCTATGG CCGGGCCGAG ATGGCGCCCC ATTCCGATGT GGACCTGCTG
TTCCTCACGC CGTGGAAGAT GACCCCCTGG GCCGAGATGG TGATCGAGAG CATGCTCTAC
ATGCTCTGGG ACCTGCGGCT GAAGGTGGGC CATTCCAGCC GCACCGTCCG GGACTGCCTC
CGCCTCGGGC GCGAGGACAT CACGATCCGC ACCGCCCTTC TCGAACATCG CTTCCTTGCC
GGGCACGAGC CCCTCGCGCA CGAACTCGAC GAAAAGCTCT GGACCGACCT CTTCCGCGGA
ACCGGCCCCG AGTTCATCGA CGCCAAGCTC GAGGAACGCG CCCAGCGCCA CAAGCGGCAG
GGCGGCCAGC GCTACGTGCT CGAACCCAAC GTGAAGGAGG GCAAGGGCGG GCTGCGCGAC
CTCCAGACGC TCTACTGGAT CGGGAAATAT CTCAACCGCG TGCCCTCGGC CTCGGGTCTC
GTGGCGGCGG GGCTGCTCAC GCGCGACGAG TTCGAGACCT TCGAGCGCGC CGAGGCCTTC
CTCTGGGCGG TGCGCTGTCA CCTGCACTAC ATCACCGGCC GCGCGACCGA CCAGCTCACC
TTCGACATAC AGGTCGAGGT GGCCTCACGC ATGGGCTATG CCGACGTCCG CGGCCGCCGC
GGGGTCGAGA TCTTCATGCA GGACTACTTC CGCCACGCGA CGCGCGTGGG CGAGCTGACC
CGCGTCTTCC TCGCCCAGCT CGAGGCGCGC CACGAAAAGC GCGAGCCCAA GCTCATGGGG
CTCTTCCGGC GCAAGAAGCG GCTGAAGCCG GGCTACAGCC TCGTGAACGG CCGGATCGAC
GTCAGCGACC CGAAGGCATT CCTCGCCGAC AAGCTGAACA TCCTGCGCAT CTTCGAGGAG
GCGCTGCGCA CGGGCCTCCT GATCCATCCC GGCGCCATGC GGATCATCGC GGCCAACCTG
CATCTGATCG ACGAGGAGAT GCAGCACGAC CGCGAGGCGA ACCGGATCTT CCTCGACACG
CTTCTGAAGC ACGGCAACCC CGAGCGCGCG CTGCGCCGGA TGAACGAACT GGGCGTGCTC
GGCGCCTTCA TCCCCGAGTT TGAGCGCATC GTCGCCATGA TGCAGTTCAA CGTCTACCAT
CACTACACGG TGGACGAGCA CACCATCCAG TGCATCTCGA CGCTGGCGCA GATCGAGCGG
CACGAACTGG ACGAGGAACT GCCGATCGCC AACCGGATCC TGACCGAGGG GATCAACCGA
CGCGTCATCT ATGTGGCGCT GCTCCTGCAC GACATCGGCA AGGGCCGCCC CGAGGACCAT
TCGATCCTGG GCGCCCAGAT CGCCCGCCGC GTCGCCCCCC GCTTCGGGCT GAACGCCGAG
GAATGCGAGA CGGTGGAATG GCTTGTCCGC TACCACTTGC TCATGTCCGA CATGGCGCAA
AAGCGCGACA TCGGCGACCC TCGGACGGTG CGCGACTTCG CCAAGGCGGT GAAGTCGAAG
AAGCGGCTTG ACCTGCTGAC CGTGCTTACC GTCTGCGACA TCCGCGGCGT GGGGCCGGGC
ACCTGGAACA ACTGGAAGGC CCAGCTTCTC CGCAAGCTCT ACCGCGACAC GGTGACGGCG
CTGGACGCGG GGCTCGAGAG CCTGAACCGC GAGAACCGGG CCGACGAGGC CAAGCGCGCG
CTGCGCGAGA TGCTCGAGGA CTGGGACCCG AAGGAGCTGA GGGCCGAACT CGGCCGTCAC
TACCCGCCCT ACTGGCAGGC GCTCTCGAAC GCGACACACG CGGTCTTCGC GCGGATGCTG
CGGAACCTCG GCGAGGACGA GATCCGCATC GACCTCGACC CCGATCCCGA CCGCGACGCC
ACCCGCGCCT GTTTCGCGCT GGCCGACCAT CCGGGCATCT TCTCGCGGCT TGCGGGGGCG
CTGGCGCTGG TGGGCGCGAA TGTGGTGGAC GCACGCACCT ACACCACCAA GGACGGCTAT
GCGACGGCCG TCTTCTGGAT CCAGGATGCC GAGGGCTCGC CCTACGAGAT CAGCCGCCTG
CCCCGCCTGA CCAGCATGAT CGACAAGACG CTCAAGGGCG AGGTCGTGGC CCGCGAGGCG
CTGCGCGACC GCGACAAGGT GAAGAAGCGC GAGTCGCAGT TCCGCTTCCC CACCCACATC
GCCTTCGACA ACGAGGGGTC GGACATCTAC ACGATCATCG AGGTGGACAC GCGCGACCGG
CCCGGCCTGC TCTATGACCT GACGCGGACG CTGGCCGCCA ACAACATCTA CATCGCCTCG
GCCGTGATCG CGACCTACGG GGCGCAGGTG GTGGACAGCT TCTATGTGAA GGACATGTTC
GGCCTCAAGC TGCACCAGAA GACCCGGCAG GAGACGCTCG AGAAGAAGCT GCGCCAGGCG
ATCCTCGAAG GCGCGGAGCG GGCGCGGCAG TGA
|
|---|
| Protein sequence | MAPASEPGAS QDPLFSGLIL PRSRIIDPEA LTRSILAEID AVSPTDPKAA RAIAVRQMTE
AKAAGNRALS ETFEARPREA RGLIRAQAVL TDGLVTTALR VACERLHPLP NPTEAERVAV
LAVGGYGRAE MAPHSDVDLL FLTPWKMTPW AEMVIESMLY MLWDLRLKVG HSSRTVRDCL
RLGREDITIR TALLEHRFLA GHEPLAHELD EKLWTDLFRG TGPEFIDAKL EERAQRHKRQ
GGQRYVLEPN VKEGKGGLRD LQTLYWIGKY LNRVPSASGL VAAGLLTRDE FETFERAEAF
LWAVRCHLHY ITGRATDQLT FDIQVEVASR MGYADVRGRR GVEIFMQDYF RHATRVGELT
RVFLAQLEAR HEKREPKLMG LFRRKKRLKP GYSLVNGRID VSDPKAFLAD KLNILRIFEE
ALRTGLLIHP GAMRIIAANL HLIDEEMQHD REANRIFLDT LLKHGNPERA LRRMNELGVL
GAFIPEFERI VAMMQFNVYH HYTVDEHTIQ CISTLAQIER HELDEELPIA NRILTEGINR
RVIYVALLLH DIGKGRPEDH SILGAQIARR VAPRFGLNAE ECETVEWLVR YHLLMSDMAQ
KRDIGDPRTV RDFAKAVKSK KRLDLLTVLT VCDIRGVGPG TWNNWKAQLL RKLYRDTVTA
LDAGLESLNR ENRADEAKRA LREMLEDWDP KELRAELGRH YPPYWQALSN ATHAVFARML
RNLGEDEIRI DLDPDPDRDA TRACFALADH PGIFSRLAGA LALVGANVVD ARTYTTKDGY
ATAVFWIQDA EGSPYEISRL PRLTSMIDKT LKGEVVAREA LRDRDKVKKR ESQFRFPTHI
AFDNEGSDIY TIIEVDTRDR PGLLYDLTRT LAANNIYIAS AVIATYGAQV VDSFYVKDMF
GLKLHQKTRQ ETLEKKLRQA ILEGAERARQ
|
|---|
| |