| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0457 |
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| Symbol | secF |
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| ID | 5082256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 453273 |
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| End bp | 454247 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640482010 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001166668 |
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| Protein GI | 146276509 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0172615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0827508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTCC GCCTCAAGCT CTGCCCCGAG AAGACGAACA TCAACTTCTT CCGCGCCGCG
CCGTTGACCT TCGGCTTCTC GGTGTTCCTC ATGGTGGCCT CGCTCGTCGT GTGGCTGACG
ATGGGACTGA ACTTCGGGAT CGACTTCCGC GGCGGCACCA CGATCCGCAC CGAATCCACC
CAGCCGGTGG ATGTGGGCGC CTACCGCACC GCGCTGCAGG GGCTCGAGCT TGGGGACATC
TCGATCACCG AGGTGTTCGA CCCCGGCTTC CGCGAGGATC AGCATGTCGC GATGGTCCGC
ATCGGGGCGC AGGACGACAC CCAGTCGATC ACGCCCGAGC AGATCGCGAC GGTCGAGGCC
GCGCTTCAGA CGGTCGATCC CACGATCACC TTCCCGTCGG TCGAGTCGGT CGGGCCCAAG
GTCTCGTCCG AGCTGATCTG GTCGGCGATC ACGGCGGTTG CGGCGGCCTG TGCGGGCATC
GCCTTCTACA TCTGGCTCAG GTTCGAATGG CAGTTCGCCG TGGGCTCGGT GGCGGCGCTG
GTCCATGACG TGCTCGTGAC GATCGGGGTC TTCGCGCTGT TTCAGATCCG GTTCGACCTG
ACGACGGTGG CGGCGCTTCT GACCGTTCTG GGCTATTCGA TCAACGACAC GGTGGTGGTC
TTCGACCGGC TTCGCGAGAA CCTCGTGAAA TACAAGTCGA TGCCGCTGCG CGACGTGATG
AACCTGTCGG TCAACGAGAC CCTGAGCCGG ACGCTCATGA CGCTGATGAC GACGCTGATC
GCGCTGAGCG CGCTGCTGGT CTTCGGCGGC GACGTGATCC GCGGCTTTGT CTTCGCCATC
ACCTTTGGCG TGGTGATCGG AACCTATTCC TCGATCTACA TGGCCAAGAA CATCGTGCTC
TATCTCGGCG TTGACCGCGG AGGGCCGAAG AAGGACAGCA AGGCGGGCAC CCAGTTCGCC
AACATCGACG CGTGA
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| Protein sequence | MAFRLKLCPE KTNINFFRAA PLTFGFSVFL MVASLVVWLT MGLNFGIDFR GGTTIRTEST
QPVDVGAYRT ALQGLELGDI SITEVFDPGF REDQHVAMVR IGAQDDTQSI TPEQIATVEA
ALQTVDPTIT FPSVESVGPK VSSELIWSAI TAVAAACAGI AFYIWLRFEW QFAVGSVAAL
VHDVLVTIGV FALFQIRFDL TTVAALLTVL GYSINDTVVV FDRLRENLVK YKSMPLRDVM
NLSVNETLSR TLMTLMTTLI ALSALLVFGG DVIRGFVFAI TFGVVIGTYS SIYMAKNIVL
YLGVDRGGPK KDSKAGTQFA NIDA
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