| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0452 |
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| Symbol | |
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| ID | 5082251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 448381 |
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| End bp | 448995 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640482005 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_001166663 |
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| Protein GI | 146276504 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0428943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCAAT TGATCGGTGC TGTCGGCGCG GCGGTCCTGG GTCTTGGCCT GGCTGTGGTG
CCCGTCGAGG TGCATGCCGA AGGGCAGACT CTTCAGCGAT CGACGATGAA CCGGGCCGGT
ATCTTCAAGT CACAGACGAG GCTTCTCGAC GGCCGTCTCT CGCAGCAATA CGAGGGCTCG
GTCCGGCTGA AGCCCAAGGT CGAGCCGATT CCGGCGGCCC TGCCTGCGGT CCGCTACAGC
GGGCGCTACA AGGGCGAGTA TCTCGAGGTT GCCAAGACGC TCGCGCGGAA GCATGGCGTG
CCCGAACAGC TGTTCCTGCG GCTGGTTCAG CAGGAATCGG GCTGGAACCC GGGTGCGGTT
TCGGTGAAGG GCGCCACGGG GCTGGCGCAG CTCATGCCGG GCACGGCGCA GCTCCTCCGC
GTGGACATCA ACGATCCGCA TCAGAATCTC GAGGGTGGCG CGCGCTACCT CAAGATGATG
TTTGACAAGT TCGGAACCTG GCAGCTTGCG CTCGCCGCCT ACAACGCCGG GCCGAAGGCG
GTTGAAAAGC ACTCGGGCAT CCCGCCCTAC CGGGAGACGC AGAATTACGT CAAGGTCATC
TTGGGCAACG GCTGA
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| Protein sequence | MRQLIGAVGA AVLGLGLAVV PVEVHAEGQT LQRSTMNRAG IFKSQTRLLD GRLSQQYEGS
VRLKPKVEPI PAALPAVRYS GRYKGEYLEV AKTLARKHGV PEQLFLRLVQ QESGWNPGAV
SVKGATGLAQ LMPGTAQLLR VDINDPHQNL EGGARYLKMM FDKFGTWQLA LAAYNAGPKA
VEKHSGIPPY RETQNYVKVI LGNG
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