| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0451 |
|---|
| Symbol | |
|---|
| ID | 5082250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 447680 |
|---|
| End bp | 448168 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640482004 |
|---|
| Product | single-strand binding protein |
|---|
| Protein accession | YP_001166662 |
|---|
| Protein GI | 146276503 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0629] Single-stranded DNA-binding protein |
|---|
| TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0123838 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGGCT CGGTCAACAA GGTCATCATC ATCGGCAATC TCGGCCGCGA TCCCGAGGTT
CGGAGCTTTC AGAACGGCGG GAAGGTCGTG AACCTGCGCA TCGCCACATC CGAGCAGTGG
CGCGACCGCG CCTCGGGCGA GCGGAAGGAG CGGACCGAGT GGCATTCGGT TGCGATCTTC
GACGAGAACC TCGCCCGGGT GGCCGAGCAA TATCTGCGCA AGGGCTCGAC GGTCTATATC
GAGGGCCAGC TCGAGACGCG GAAGTGGCAG GACCAGTCGG GCCAGGACCG CTACACGACC
GAGGTCGTGC TGCGCCCGTT CCGCAGCGCC CTGACGATGC TCGGAGGCCG CGGAGACAGC
GCGGGCTCCG GCGGCGGCTA CGAAGACCGC GGCGGCTCGG AAAGCTACGA CAACTTCGGA
GGCTCCCGCG GCAACGCCCC CTCGGGTGGC GGTCGGCGGA GCGATCTGGA TGACGAGATC
CCGTTCTGA
|
|---|
| Protein sequence | MAGSVNKVII IGNLGRDPEV RSFQNGGKVV NLRIATSEQW RDRASGERKE RTEWHSVAIF
DENLARVAEQ YLRKGSTVYI EGQLETRKWQ DQSGQDRYTT EVVLRPFRSA LTMLGGRGDS
AGSGGGYEDR GGSESYDNFG GSRGNAPSGG GRRSDLDDEI PF
|
|---|
| |