Gene Rsph17025_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0413 
Symbol 
ID5082501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp411338 
End bp411736 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content70% 
IMG OID640481965 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001166624 
Protein GI146276465 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGG ACAGCCCCGG GTGGTTCAGC AACGAAACAG CGACCTTCGG AGACCGCCTC 
GCCGGCGCGC GTGAAGCGGC CGGCCTGACG CAGGAAGAGA TGGCGCGTCG GCTCGGCGTG
CGGCTGAAGA CGCTGCAATC CTGGGAGGAT GACCTGGCCG AGCCGCGCGC GAACCGGCTG
CAGATGATGG CCGGGATGCT GAATGTGAGC CTGCGGTGGC TGCTGACCGG CGAGGGCGAC
GGGGTCGAGG GCCCGTCGGA ACCTGTGGTG CTGCCGGCCG AGGGCCGCGA GGCGCTGGCC
GAGCTGGCGC GGATGCGCAC GCAGACGCTT GCGCTGGCGC AGGAGATGGG GCAGCTGGAA
AAGAGGATGC GGGCGCTCTT GCGCAAGGAG GCGGAATGA
 
Protein sequence
MAADSPGWFS NETATFGDRL AGAREAAGLT QEEMARRLGV RLKTLQSWED DLAEPRANRL 
QMMAGMLNVS LRWLLTGEGD GVEGPSEPVV LPAEGREALA ELARMRTQTL ALAQEMGQLE
KRMRALLRKE AE