Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0411 |
Symbol | |
ID | 5082499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 408622 |
End bp | 409983 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640481963 |
Product | MATE efflux family protein |
Protein accession | YP_001166622 |
Protein GI | 146276463 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCCACC ATCCGACCTT TACCGGCCAC GCGAGGGCGA TTCTCGCGCT GGGGCTTCCT CTTGTCGGAA GCCACGTGGC GCAGATGTCG CTGCATGTCA CCGACACGGT GATGCTGGGC TGGTATGGAG TGACCGAGCT GGCCTCGGTC GTGCTGGGGG CCTCGCTCTT CTTCGTCACC TTCATTCTCG GCTCGGGCTT TGCGCAGGCG GTCATGCCGA TGGTGGCCGA AGCGCTGGGG CGCGGAGACG AGACGCAGGT GCGGCGCGAC ACCCGCATGG GGCTCTGGCT GTCCATCGCC TTCGGGGCGC TGGTCTATCC GCTGTTCTGG TTCTCGGGCA CCCTCCTTCT GGCGCTTCGC CAGCAGCCCG AGGTGGCGGC GCTCGCGCAG GATTACCTGC GGATCGCGGG GCTGGGCATG GTGCCCGCGC TGCTGATCAT GGTGCTCAAG AGCTACCTCT CGGCGCTGGA ACGGACGCAG ATCGTGCTGT GGGCCACGCT GGCCGCGGTG GTGGTGAATG CCGGCCTGAA CTGGGTGCTG ATCTTCGGCA AGCTGGGGGC GCCCGAGCTG GGTGTCGAGG GGGCCGCCAT CGCTTCGGTC GGGGCGCAGC TCATGTCGCT GGCAGCCCTA GGGCTCTATG CGGCGCTTCT GCCGCCCCTG CGTCGGTTCA ACCTGTTCCA GCGGTTCTGG CGCCCGGACT GGCATGCGCT GGCGCGGGTC TTCGCGCTCG GCTGGCCCAT CGGTCTGACC GGACTGGCCG AGGGGTCGAT CTTTCAGGCG GCGGCGCTGA TGATGGGCTG GCTCGGCACC GTGCCGCTGG CGGCCCATGG GATCGCGCTC GAGGTGACGG CGCTGGCCTT CATGGTCCAT GTGGGGATCT CGAACGCCGC CACGATCCGC ACCGGGCGCG CGGACGGGGC AGGGGACACC GCGGGGCTGC GCGACGGGGC CAAGGTGGCG ATCCTGCTCT CGCTGGTCTT CGGGCTCCTG ATGGTTGCCA TCTTCCTGCT TGCGCCGGGA CCGATCATTG CGCTCTTCCT TGATCGCGCG AACCCGCAGT TCGACGAAAT CGTGGCCTTC GGCTCGGTCC TGCTGGCCTT TGCCGCCCTG TTCCAGATCG CGGATGCGAT GCAGGTGATC GCGCTGGGCC TGTTGCGCGG GCTGCGCGAC ACGCAGGTGC CGATGTGGCT GGCCAGCTTC AGCTACTGGA TGGTGGGGAT CCCGGCGAGC TATCTCCTCG CCTTTCCGAT GGGACTGGGC GGGCCCGGGC TCTGGCTCGG GCTGGTGGTG GGGCTGACGC TCGCGGCGAT CCTGCTCATG ACGCGCTTCT GGATGCGCGC CCCTCGGCTG GCGCTGGCCT GA
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Protein sequence | MFHHPTFTGH ARAILALGLP LVGSHVAQMS LHVTDTVMLG WYGVTELASV VLGASLFFVT FILGSGFAQA VMPMVAEALG RGDETQVRRD TRMGLWLSIA FGALVYPLFW FSGTLLLALR QQPEVAALAQ DYLRIAGLGM VPALLIMVLK SYLSALERTQ IVLWATLAAV VVNAGLNWVL IFGKLGAPEL GVEGAAIASV GAQLMSLAAL GLYAALLPPL RRFNLFQRFW RPDWHALARV FALGWPIGLT GLAEGSIFQA AALMMGWLGT VPLAAHGIAL EVTALAFMVH VGISNAATIR TGRADGAGDT AGLRDGAKVA ILLSLVFGLL MVAIFLLAPG PIIALFLDRA NPQFDEIVAF GSVLLAFAAL FQIADAMQVI ALGLLRGLRD TQVPMWLASF SYWMVGIPAS YLLAFPMGLG GPGLWLGLVV GLTLAAILLM TRFWMRAPRL ALA
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