| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0407 |
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| Symbol | |
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| ID | 5082495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 403168 |
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| End bp | 405159 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640481959 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001166618 |
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| Protein GI | 146276459 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTATTTC AATCGTCCAG AAAGAATCGA GCAGCCATGG CCAACGACCT TCTCTCCGGC
CAGCCGGAAA CCTATGACGC CTCCTCGATC GAGGTGCTCG AAGGGCTCGA GCCCGTCCGC
AAGCGTCCCG GCATGTATAT CGGCGGCACC GACGAACGGG CGCTGCACCA TCTGGTGGCC
GAGATCCTCG ACAACTCGAT GGACGAGGCC GTGGCGGGCC ATGCGACGCG GATCGAGGTC
GAACTTCACG CCGATCACTC CGTGACGATC CGCGACAACG GCCGCGGCAT CCCGGTCGAT
CCGCATCCGA AGTTTCCCGG CAAGTCGGCG CTCGAGGTGA TCCTCTGCAC GCTGCACGCG
GGCGGCAAGT TCTCGGGCAA GGCCTACCAG ACCTCAGGCG GCCTGCACGG CGTCGGCGCC
TCGGTGGTGA ACGCGCTCTC GGACACGATG CGGGTCGAGG TCGCGCGCAA CCGCGAACTC
TGGGTGCAGA GCTTCGCCCG CGGCATCGCG CAGGGCCCGG TCAAGATGGT GGGCGCCGCC
TCGAACCGCC GCGGCACCAC GATCACCTTC CACCCGGACC CTGAGATCTT CGGCCATCTG
CAGTTCAAGC CCGCCCGCCT GATGAAGATG GCGCGGTCCA AGGCCTATCT CTTCTCGGGC
GTCGAGATCC GCTGGAAATC GGCGATCCCC GACGGCGACA CCCCGCAAGA GGCCGTCTTC
CACTTCCCCG GCGGCCTGGG CGATTACCTC GCCGAGCAGC TCTCCGGCGC CTCGACCTAT
GCCGAGAAGC CCTTCGCCGG GAAGGTGGGC TTTCAGGAGA AGTTCGGCGT TCCCGGCTCG
GTCGAATGGG CGATCAACTG GACGCCCGCA CGCGACGGCT TCATCCAGTC CTACTGCAAC
ACCGTCCCCA CCCCCGAGGG CGGCACGCAT GAGAGCGGCT TCTGGTCGGC GATCCTCAAG
GGCATCCGCG CCTATGGCGA GCTGGTGAAG AACCGCAAGG CCGACCAGAT CACCCGCGAG
GACATGCTGG CCGGCGGCTC GGCGCTGATC TCGGTCTTCA TCCGCGAGCC GCAGTTCGTG
GGCCAGACCA AGGACCGTCT TTCCACCGAA GAGGCCGCGA AGCTGGTCGA GAACGCGGTG
CGCGACCATT TCGACAACTG GCTGGCGGCC AACACGAAAT CGGCCGGTGC CATCCTCGAC
TTCCTCGTGC TGCGCGCCGA GGAGCGCCTC CGCCGCCGGC AGGAGAAGGA AACCCAGCGC
AAGAGCGCGA CGAAGAAACT GCGCCTGCCG GGCAAGCTGG TGGACTGCTC CGCCACCGCC
CGTGACGGGA CCGAGCTCTT CATCGTCGAA GGCGACTCGG CCGGCGGCTC GGCCAAGATG
GCGCGCGACC GCACGCTTCA GGCCCTGCTG CCGCTGCGGG GCAAGATCCT GAACGTGCTG
GGCGCGGCCT CGGGCAAGAT GGGGGCGAAC GCCGAGATCA ACGACCTGTG CCTGGCGCTG
GGCACCGGGA TGGGGACGCG CTTCAACATC GACGACCTGC GCTATGACAA GATCATCATC
ATGACCGATG CCGATGTGGA TGGCGCCCAC ATCGCCTCGC TGCTGATGAC CTTCTTCTTT
ACCCAGATGC GGCCGCTGAT CGACCGCGGA CATCTCTACC TCGCCTGCCC GCCGCTCTAT
CGCCTCACGC AGGGGGCCAA GCGGCTCTAC GTCGCCGACG ACGTGGAAAA GGAGCTGTGG
CTGGCCAAGG GTCTCGGCGG CAAGGGCAAG ATCGACGTGC AGCGCTTCAA GGGCCTGGGC
GAGATGGATG CCAAGGACCT GAAGGATACC ACGATGAACC CGGCCACGCG CAAGCTGATC
CGCGTCTCGA TCGACGAGGA CGAGCCGGGC GAGACCGGCG ACCTCGTGGA GCGCCTGATG
GGCAAGAAGC CCGAGCTGCG CTTCCAGTAT ATCCAGGAGA ACGCGCGCTT CGTGGAGGAA
CTCGACGTCT GA
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| Protein sequence | MVFQSSRKNR AAMANDLLSG QPETYDASSI EVLEGLEPVR KRPGMYIGGT DERALHHLVA
EILDNSMDEA VAGHATRIEV ELHADHSVTI RDNGRGIPVD PHPKFPGKSA LEVILCTLHA
GGKFSGKAYQ TSGGLHGVGA SVVNALSDTM RVEVARNREL WVQSFARGIA QGPVKMVGAA
SNRRGTTITF HPDPEIFGHL QFKPARLMKM ARSKAYLFSG VEIRWKSAIP DGDTPQEAVF
HFPGGLGDYL AEQLSGASTY AEKPFAGKVG FQEKFGVPGS VEWAINWTPA RDGFIQSYCN
TVPTPEGGTH ESGFWSAILK GIRAYGELVK NRKADQITRE DMLAGGSALI SVFIREPQFV
GQTKDRLSTE EAAKLVENAV RDHFDNWLAA NTKSAGAILD FLVLRAEERL RRRQEKETQR
KSATKKLRLP GKLVDCSATA RDGTELFIVE GDSAGGSAKM ARDRTLQALL PLRGKILNVL
GAASGKMGAN AEINDLCLAL GTGMGTRFNI DDLRYDKIII MTDADVDGAH IASLLMTFFF
TQMRPLIDRG HLYLACPPLY RLTQGAKRLY VADDVEKELW LAKGLGGKGK IDVQRFKGLG
EMDAKDLKDT TMNPATRKLI RVSIDEDEPG ETGDLVERLM GKKPELRFQY IQENARFVEE
LDV
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