Gene Rsph17025_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0406 
Symbol 
ID5082494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp401810 
End bp403024 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content70% 
IMG OID640481958 
Productmannonate dehydratase 
Protein accessionYP_001166617 
Protein GI146276458 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1312] D-mannonate dehydratase 
TIGRFAM ID[TIGR00695] mannonate dehydratase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCAGA CATGGCGGTG GTTCGGGCCG AAGGACCTCG TGTCGGTGGA CGACATGCGG 
CAGGCGGGGG TGGAGGGCGT GGTCTCGGCG CTGCACCACA TTCCCACCGG CGCGCTCTGG
ACGCCGGACG AGATCGCCCG GCGCCAGCGC CAGATCGGGG TGATGCGGGA CGGCTCGGCC
TCGGGGCTCA ACTGGGAGGT GGTCGAGAGC CTGCCGGTGT CCGAGGACAT CAAGAAGCAG
AAGGGCGAGT GGCGCGCGCA TCTCGAGACC TGGAAGGAGT CGATGCGCAA CCTCCGCGCG
GCCGGGATCG AGGTGATCTG CTACAACTTC ATGCCGGTTC TCGACTGGAC GCGGACCGAT
CTCGCCTGGC GGCGGCCTTC GGGCGCGACC TGCATGCGGT TCGACCTGCC GGACTTCGCC
GCCTTCGACA TCCATATCCT GGAGCGGCCC GGCGCGGCCG AGGAATTCCC GGAATGGGTC
GTGGCGGAAG CCGCGCTGCG CCTGGCCGGG ATGGACGAGG ATCGCAAGGC GGCGCTGGCG
CGGAACGTGG TCTTCGGCCT GCCCGGCGCG GCCGAGCAGT TCACGCTGGA GGATGTGCGC
CGCCATCTCG CCGAATATGC CGGGATGAGC GCCGGGACGC TGCGGCGGCA TCTGATCGAC
TTCCTGTCGG AAGTGGCGCC CCTGGCCGAG GAGATCGGCG TCCGGCTCTG CTGTCATCCC
GACGATCCGC CCTTCCCGCT GCTGGGCCTG CCGCGCGTCA TGTCCACCGA GGCCGATTAC
GCCGAGGTGA TGCAGGCGGT GGATCTCAAG GCCAACGGCA TCACGCTCTG CACCGGCAGC
CTCGGCGCGC GGCCCGACAA CGACCTGCCG GGCATGATGG AGCGGATGGG CGAGCGGGTG
CATTTCCTCC ACCTGCGCAA CGTCACGCTG GAAGGGGGCG ATCTGCGCAA CTCGTTCTTC
GAGGACGGAC ATCTGGACGG CGGCACGGAC ATGGTGGCGA TGATCGCCGC GGTGCTGGCC
GAGGAACGGC GGCGCGAGGC CGAGGGGCGG ACGGACATCT CGATCCCGAT GCGGCCCGAC
CACGGGCAGG ACATCCTTGA CGATCTCGGC CGCAAGGGGC AGCCGGGTTA TCCCGCGATC
GGGCGGCTGA AGGGGCTGGC CGAGCTGCGC GGGATCATGA CCGCGCTGGA TCACCCGCTG
GTGCGCGGGG CCTGA
 
Protein sequence
MRQTWRWFGP KDLVSVDDMR QAGVEGVVSA LHHIPTGALW TPDEIARRQR QIGVMRDGSA 
SGLNWEVVES LPVSEDIKKQ KGEWRAHLET WKESMRNLRA AGIEVICYNF MPVLDWTRTD
LAWRRPSGAT CMRFDLPDFA AFDIHILERP GAAEEFPEWV VAEAALRLAG MDEDRKAALA
RNVVFGLPGA AEQFTLEDVR RHLAEYAGMS AGTLRRHLID FLSEVAPLAE EIGVRLCCHP
DDPPFPLLGL PRVMSTEADY AEVMQAVDLK ANGITLCTGS LGARPDNDLP GMMERMGERV
HFLHLRNVTL EGGDLRNSFF EDGHLDGGTD MVAMIAAVLA EERRREAEGR TDISIPMRPD
HGQDILDDLG RKGQPGYPAI GRLKGLAELR GIMTALDHPL VRGA