| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0391 |
|---|
| Symbol | |
|---|
| ID | 5082227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | - |
|---|
| Start bp | 384673 |
|---|
| End bp | 385647 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640481943 |
|---|
| Product | aminotransferase, class I and II |
|---|
| Protein accession | YP_001166602 |
|---|
| Protein GI | 146276443 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01140] L-threonine-O-3-phosphate decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.595469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGACC ACGGCGGCAA CCTTGACAGC GCGGCGGCGC TTTACGGCGG CGCGGTCGCG
GACTGGCTCG ACCTCTCGAC GGGGATCAAC CGGGTGCCCT ACCCGATGCC CCCCCTGCCC
CCGCGCGCCC TGACGGCGCT GCCCGATGCG GCCGCCGAGG CGCGGCTGCT GGCGTCGGCC
CGGATCGCCT ACCGCACCGA GGCACCGATG CTGCCACTGG CCGGCGCGCA AGCGGCCATC
CAGCTTGTCC CGCGGCTGGC ACCCGCAGGC CGGGCCCGCA TCCTCGGGCC GACCTACAAC
GAACATGCGG CCAGCCTGCG GGCGTCGGGC TGGCAGGTCG AGGAGGTGGG CGATCTCGAG
GCGCTGGCGG GCGCTGACCT TGCCGTTCTC GTCCATCCGA ACAATCCCGA CGGCCGCCGC
CATGCGCCCC ACAGCCTCCG TGCGCTGCTG CCACGGGTGG GGCGGCTGCT GGTGGACGAG
AGCTTCGCCG ACCCGCTGCC CGAGCTTTCG CTCGCGCCCG AGGCGGGGGT GCCGGGGCTG
CTGGTGCTGC GCTCGTTCGG CAAGTTCTAC GGGCTGGCGG GGCTGAGGCT CGGCTTCGTT
CTGGGCTCTG CCCTCGACGT TGCGGCGCTG GCGCGGATGG CCGGGCCCTG GGCGGTTTCG
GGTCCGGCCC TTGCCGCCGG AGAGGTGGCG CTGTCGGACC GCGATTGGGC CCGCGCGACA
ACCGGGCGTC TGGCGGCGGA GGGGCCGCGG CTCGACGCGC TGGCGGCCCG CATGGGCTGG
CGGCTGGCGG GCGGCGCGCA TCTCTTCCGT CTCTATGAGA TCGAGGATGC CCGCACCGCG
CAGGAGCATC TTGCCCGCGC CCGGATCTGG AGCCGGATCT TTCCCTGGTC GGACCGGCTG
ATCCGCCTCG GCCTGCCGGG GGGCGAGGCC GAATGGGCCC GCCTCGACGC GGCTCTGCGG
CCCGGAAACC GTTAG
|
|---|
| Protein sequence | MRDHGGNLDS AAALYGGAVA DWLDLSTGIN RVPYPMPPLP PRALTALPDA AAEARLLASA
RIAYRTEAPM LPLAGAQAAI QLVPRLAPAG RARILGPTYN EHAASLRASG WQVEEVGDLE
ALAGADLAVL VHPNNPDGRR HAPHSLRALL PRVGRLLVDE SFADPLPELS LAPEAGVPGL
LVLRSFGKFY GLAGLRLGFV LGSALDVAAL ARMAGPWAVS GPALAAGEVA LSDRDWARAT
TGRLAAEGPR LDALAARMGW RLAGGAHLFR LYEIEDARTA QEHLARARIW SRIFPWSDRL
IRLGLPGGEA EWARLDAALR PGNR
|
|---|
| |