| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0373 |
|---|
| Symbol | |
|---|
| ID | 5082209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 369013 |
|---|
| End bp | 370083 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640481925 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001166584 |
|---|
| Protein GI | 146276425 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.112359 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.427552 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGAA CCCCGCAGAT CGGAAGGGGG CGCGGCCGCG CCCTCTCCCT CTGGCTCTGG
AAGGGCACGA AGGTGGCCCT CACGGTCGCG GTGACCTTCC TGGGCCTCCT TCTCGTCACC
TTCGTCATCA GCCGCTACAT GTCGGTCGAT CCCGTGCTGC GGGCCGTCGG CGACCGTGCG
AGCCAGTCCA CCTACGACGC GATGTATCGC GCCATGGGCC TCGACCGCCC GGTGTGGGAG
CAGTTCTGGA TCTACCTGCG CAACGTGCTC TCGGGCGATC TCGGCAGCTC GTTCCTGACC
AAGCGGCCGG TCGCGGACGA TCTGGCACGG GTCTTTCCCG CCACGCTCGA GCTGGCGACC
GTGGGCATCC TGATCGGAAC GCTCTTCGGC ATCCCGCTGG GGGTGATCTC GGCCGTGAAA
CAGGGGCGCG CCATCGACCA GGTCGTGCGC GTCCTGGGCC TCGTGGGCTA TTCGGCGCCG
ATCTTCTGGC TCGGGCTGCT TGGCCTTCTC GTCTTCTACG CCCGGCTCGG CTGGGTCGCG
GGGCCGGGGC GGATCGACAT CGCCCATGAA TACAGTTTCA CCGTGACGAC GGGGCTTCTC
CTGCTCGACA GCGCCATGCA GGGCGCCTGG GGCGCCTTCC GCAACGCCTT CTCGCACATC
ATCCTGCCCG GCGCGCTGCT CGGCTATTTC TCGATGGCCT ACATCAGCCG CATGACGCGC
AGCTTCATGC TGGCGGAACT CGCGCAGGAA TATGTCACCA CCGCCCGGGT CAAGGGCGTG
CCCGAGTGGC GGATCGTCTG GGTCCATGCG CTGCGCAACG CCGCCGTGCC GCTCGTGACC
GTGGTGGCGC TCTCCTACGC GGGCCTTCTC GAAGGCTCGG TCCTGACCGA GACGGTCTTC
GCCTGGCCGG GCCTCGGCCT CTATCTCACC AACAGCCTGC AGGTGGCCGA CATGAACGCC
GTCCTTGGCG GGACACTCGT GATCGGTGCC ATCTTCGTGG CGCTGAACCT CTTGTCGGAC
CTGCTCTACA CGATCCTCGA CCCGCGCACG CGGCGGCAGG TGCGGCCATG A
|
|---|
| Protein sequence | MAGTPQIGRG RGRALSLWLW KGTKVALTVA VTFLGLLLVT FVISRYMSVD PVLRAVGDRA
SQSTYDAMYR AMGLDRPVWE QFWIYLRNVL SGDLGSSFLT KRPVADDLAR VFPATLELAT
VGILIGTLFG IPLGVISAVK QGRAIDQVVR VLGLVGYSAP IFWLGLLGLL VFYARLGWVA
GPGRIDIAHE YSFTVTTGLL LLDSAMQGAW GAFRNAFSHI ILPGALLGYF SMAYISRMTR
SFMLAELAQE YVTTARVKGV PEWRIVWVHA LRNAAVPLVT VVALSYAGLL EGSVLTETVF
AWPGLGLYLT NSLQVADMNA VLGGTLVIGA IFVALNLLSD LLYTILDPRT RRQVRP
|
|---|
| |