Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0363 |
Symbol | |
ID | 5082199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | + |
Start bp | 360280 |
End bp | 360957 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640481915 |
Product | hypothetical protein |
Protein accession | YP_001166574 |
Protein GI | 146276415 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.879459 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGGAA GCCTTGTGGA AGACCCGCTT CGCGGAGCTG CCGACGATCC CGAGCTGAGG CTCATCGAGA CGCTGCTGTG GGACGGAAGC CGTCTCGTGC GGCTCCGGCG CCATCTGAGG CGCCTTGAGG GGGCCGCGGC CCGGCTGGGC TGGCGGTGCC GGGGGGCGGG TGACGCCCTG AAGGCGGCGG TGCCCGAGGC GCCTGCCCGG ATGCGCCTCA CGCTCGACCG CGAGGGGCGG ATGGCCGTCG AGGTGGTGCC GCTGCCGCCG GCGAAGCGCC TCTGGCGGGT GGGGCTCGCG GAGGAACGGC TGTGCTCGGC CGATCCCTGG CTGCAGGTGA AGTCGAGCCG CCGGGCGGCC TATGATGCCG CGCGGGCGGC GCTGCCGGAG GGGATCGACG AGCTTCTCTT CCTCAACGAG CGCGGCGAAC TCTGCGACGG AACCATCACG ACCGTCTTCT TCGACGCGGG CGAGGGGATG CGGACGCCGC CCCTGTCGTC GGGGCTGCTG CCGGGGATCC TGCGCGAGTC GATGCTGGAC GCGGGCCGCT GCCGCGAGGC GCCGCTGCCG GGCGAGGCGC TGCCCCGCGT GCGGCTGTGG GTCGGCAATT CGCTGCGCGG GTTGATGGTG GCGGAATGGG CGGGAGACGG CGCCGGAAGG GAACCGGCGC CCTCCTGA
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Protein sequence | MGGSLVEDPL RGAADDPELR LIETLLWDGS RLVRLRRHLR RLEGAAARLG WRCRGAGDAL KAAVPEAPAR MRLTLDREGR MAVEVVPLPP AKRLWRVGLA EERLCSADPW LQVKSSRRAA YDAARAALPE GIDELLFLNE RGELCDGTIT TVFFDAGEGM RTPPLSSGLL PGILRESMLD AGRCREAPLP GEALPRVRLW VGNSLRGLMV AEWAGDGAGR EPAPS
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