Gene Rsph17025_0363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0363 
Symbol 
ID5082199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp360280 
End bp360957 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content74% 
IMG OID640481915 
Producthypothetical protein 
Protein accessionYP_001166574 
Protein GI146276415 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.879459 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGGAA GCCTTGTGGA AGACCCGCTT CGCGGAGCTG CCGACGATCC CGAGCTGAGG 
CTCATCGAGA CGCTGCTGTG GGACGGAAGC CGTCTCGTGC GGCTCCGGCG CCATCTGAGG
CGCCTTGAGG GGGCCGCGGC CCGGCTGGGC TGGCGGTGCC GGGGGGCGGG TGACGCCCTG
AAGGCGGCGG TGCCCGAGGC GCCTGCCCGG ATGCGCCTCA CGCTCGACCG CGAGGGGCGG
ATGGCCGTCG AGGTGGTGCC GCTGCCGCCG GCGAAGCGCC TCTGGCGGGT GGGGCTCGCG
GAGGAACGGC TGTGCTCGGC CGATCCCTGG CTGCAGGTGA AGTCGAGCCG CCGGGCGGCC
TATGATGCCG CGCGGGCGGC GCTGCCGGAG GGGATCGACG AGCTTCTCTT CCTCAACGAG
CGCGGCGAAC TCTGCGACGG AACCATCACG ACCGTCTTCT TCGACGCGGG CGAGGGGATG
CGGACGCCGC CCCTGTCGTC GGGGCTGCTG CCGGGGATCC TGCGCGAGTC GATGCTGGAC
GCGGGCCGCT GCCGCGAGGC GCCGCTGCCG GGCGAGGCGC TGCCCCGCGT GCGGCTGTGG
GTCGGCAATT CGCTGCGCGG GTTGATGGTG GCGGAATGGG CGGGAGACGG CGCCGGAAGG
GAACCGGCGC CCTCCTGA
 
Protein sequence
MGGSLVEDPL RGAADDPELR LIETLLWDGS RLVRLRRHLR RLEGAAARLG WRCRGAGDAL 
KAAVPEAPAR MRLTLDREGR MAVEVVPLPP AKRLWRVGLA EERLCSADPW LQVKSSRRAA
YDAARAALPE GIDELLFLNE RGELCDGTIT TVFFDAGEGM RTPPLSSGLL PGILRESMLD
AGRCREAPLP GEALPRVRLW VGNSLRGLMV AEWAGDGAGR EPAPS