Gene Rsph17025_0360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0360 
Symbol 
ID5082196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand- 
Start bp354767 
End bp355498 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content68% 
IMG OID640481912 
Producthemolysin-type calcium-binding region 
Protein accessionYP_001166571 
Protein GI146276412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.624774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACGA TCATCGGAAA CGGCTCGGCC AACCGGCTGA ACGGCAGCAA CCTCAACGAC 
ATCATTCGGG GCCTGGATGG CGAGGACACC ATCTTTGGCA ATGGCGGGCG CGACCGCATC 
GAGGGCAACG ACGACGACGA CCTGCTCTAT GGCGGCGCCG GCGCGGATAC GATCCTCGGC 
GGCAAGGGCG AGGACCGGCT TTACGGTCAG GGCGGCGACG ACCTGATGAC CGACGAGAGC 
GGCAACGACC GCTTCTTCGG CGGCGCGGGC AACGACACGA TCCGCGCCGG CGAGGGCAAT 
GACCTGCTCG ACGGCGGCAC CGGAGCCGAT CTGCTTGTCG CGGGCTCCGG CAACGACACG 
CTGCGCGGCG GCGACGGCGC TGACCGGCTG CACGGCGGCG AGGGCAACGA CCGGATGAGC 
GGCGGCGCCG GCAACGACCG GATGTGGGGC GGCGAGGGCG ACGACGTGCT GAACGGCGGC 
CGGGGCAACG ACGTGATGAT CGGCGGCGAA GGCGACGACC GCTTCGTGTT CAACTTCGGC 
GCCGATGTGA TCCGCGACTT CGACGACGAT GACGACAAGA TCGACCTGTC GTCCTTCGGC 
CTCACCTACG CGCAGGTGAT GAACCGGACC GTCGAGCGAG GCGAGGATGT GCTGATCCGC 
ATCGGCGCCC ATTCCCTGCG CATCGAGGAC ACGTCGCGCA GCGATCTCGA CCGCGACGAC 
TTCATTCTGT GA
 
Protein sequence
MPTIIGNGSA NRLNGSNLND IIRGLDGEDT IFGNGGRDRI EGNDDDDLLY GGAGADTILG 
GKGEDRLYGQ GGDDLMTDES GNDRFFGGAG NDTIRAGEGN DLLDGGTGAD LLVAGSGNDT 
LRGGDGADRL HGGEGNDRMS GGAGNDRMWG GEGDDVLNGG RGNDVMIGGE GDDRFVFNFG 
ADVIRDFDDD DDKIDLSSFG LTYAQVMNRT VERGEDVLIR IGAHSLRIED TSRSDLDRDD 
FIL