| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0354 |
|---|
| Symbol | glyA |
|---|
| ID | 5082621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 349462 |
|---|
| End bp | 350757 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640481906 |
|---|
| Product | serine hydroxymethyltransferase |
|---|
| Protein accession | YP_001166565 |
|---|
| Protein GI | 146276406 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0389221 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC CGCACCGCGA CGACGGCTTC TTTACCGAAA GCCTGTCCTC CCGTGACCCC
GAGCTTTTCG CCTCGATCAC CGGCGAGCTT GGCCGGCAGC GCGACGAGAT CGAACTGATC
GCCTCGGAGA ACATCGTGAG CCGCGCCGTG ATGGAGGCGC AGGGCTCGGT CATGACCAAC
AAGTACGCCG AGGGCTACCC GGGCAAGCGC TACTATGGCG GCTGCGACTA CGTGGACGTC
GCCGAGACGC TGGCCATCGA GCGGGCGAAG CAGCTCTTTG GCTGCGCCTT TGCCAACGTC
CAGCCCAACT CGGGCAGCCA GGCCAACCAG GGCGTGTTCC AGGCGCTGAT CAAGCCGGGC
GACACGATCC TCGGGATGGA GCTGGCCTCG GGCGGGCACC TGACGCATGG GGCGGCGCCG
AACCAGTCGG GCAAGTGGTT CCATGCGGTC CAGTATGGCG TGCGCCAGCA GGACCAGCGG
ATCGACTACG ATCAGGTCGC GGCGCTGGCC CGCGAGCACA AGCCCCGGCT CATCATCGCC
GGCGGCTCGG CCATCCCGCG CCAGATCGAC TTTGCGAAGT TCCGCGCCAT TGCCGATGAA
GTCGGCGCCT GGCTGATGGT GGACATGGCG CATTTCGCGG GCCTCGTCGC GGGCGGCGCG
CATCCCTCGC CCTTCCCCTA CGCCGATGTG GCCACCACCA CGACGCACAA GACCCTGCGC
GGCCCGCGCG GCGGCATGAT CCTCACGAAC AACGAGGAGA TCGCGAAGAA GGTCAATTCG
GCGATCTTCC CCGGCATCCA GGGCGGCCCG CTGATGCATG TGATCGCCGC GAAGGCCGTG
GCCTTCGGCG AGGCGCTGCG GCCCGAGTTC AAGGCCTACG CCGCGCAGGT CGTGAAGAAC
GCGCAGGCGC TGGCGGACGA GCTGATGAAG GGCGGGCTCG ACATCGTGAC GGGCGGCACT
GACACCCATG TGATGCTCGT GGACCTGCGC CCGAAGGGCG TGAAGGGCAA CGCGACCGAA
AAGGCGCTGG GCCGCGCGCA CATCACCTGC AACAAGAACG GCATCCCGTT CGACCCCGAG
AAGCCGATGG TGACCTCGGG CGTGCGTCTC GGCACGCCGG CCGGCACCAC CCGCGGCTTC
GGCGAGGAGG AGTTCCGCGA GATCGGCCGC CTGATCGTCG AGGTGGTGGA CGGGCTCGCC
GCCCATGGCG AAGAGGGCAA TGCCGCGGTC GAGGAGGCCG TCAAGGCCAA GGTTGCGGCG
CTCTGCGCCC GCTTCCCGCT CTACCCGACG CTCTGA
|
|---|
| Protein sequence | MNAPHRDDGF FTESLSSRDP ELFASITGEL GRQRDEIELI ASENIVSRAV MEAQGSVMTN
KYAEGYPGKR YYGGCDYVDV AETLAIERAK QLFGCAFANV QPNSGSQANQ GVFQALIKPG
DTILGMELAS GGHLTHGAAP NQSGKWFHAV QYGVRQQDQR IDYDQVAALA REHKPRLIIA
GGSAIPRQID FAKFRAIADE VGAWLMVDMA HFAGLVAGGA HPSPFPYADV ATTTTHKTLR
GPRGGMILTN NEEIAKKVNS AIFPGIQGGP LMHVIAAKAV AFGEALRPEF KAYAAQVVKN
AQALADELMK GGLDIVTGGT DTHVMLVDLR PKGVKGNATE KALGRAHITC NKNGIPFDPE
KPMVTSGVRL GTPAGTTRGF GEEEFREIGR LIVEVVDGLA AHGEEGNAAV EEAVKAKVAA
LCARFPLYPT L
|
|---|
| |