Gene Rsph17025_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0328 
Symbol 
ID5082595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp322158 
End bp323354 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content72% 
IMG OID640481880 
ProductVWA containing CoxE family protein 
Protein accessionYP_001166539 
Protein GI146276380 
COG category[R] General function prediction only 
COG ID[COG3552] Protein containing von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCC AGGCCCCCGC CGACGGCAGC CTCACCCGCA ACATCCTGTG GTTCGCCCGC 
GCGCTTCGCA AGGCGGGCCT GCCCATCGGC TCGGGCCGCG TGGCCGATGC CGTCCGCGCA
GTCGAGGCCA CCGGCTTCAC CTCGCGCGAG GATTTCTACT GGACGCTCCA CGCCTGCTTC
GTCTCGCGCC CCGAGCATCG TGCCACCTTC GCGCAGGTCT TCCGCCTCTT CTGGCGCGAC
CCGCAGTTCC TCGAGCAGAT GATGAGCCTC CTCCTGCCGC AACTGCGCGC CGCGCCCGAG
GATCGACCGC CCGATCCCGC CGAGAAGCGC GCGGCCGAGG CGCTGCTCGA TGGCGCTCCG
CGACCCGAGC GCGCCGCGCC CGAGCCCGAA GGCAGCCTCA TCGAGATCGA CGCCGCCGAA
ACCGCCTCGG AGCAGGAGCG GCTGAAGCGG CTCGATTTCG AGCAGATGTC CACAGCCGAG
ATGGACGAGG CCCGGCGCAT GCTCGCGCGG CTGTCGCTGC CGGTGCCGCC GATCCGCTCG
CGGCGTCTGG TTGCCGCCGC GGGCGGGCCG CGGGTCGATC TGCGCCGGAC GCTGGTGCGG
GCGCTGCGGC AGGGCGGCGA GATCCCCGCG CTCGCCCGCC GCCGTCGGGC GCTGCGCTGG
CCGAACCTCG TGGTGCTCTG CGACATCTCC GGGTCCATGT CGCGCTATTC GCGGCTGGTT
CTCCACTTCA TTCACGCAGT CGCCAACCGA AAGGGGCAGG GCTGGGCGCG GGTCCATGCC
TTCACCTTCG GCACGCGGCT TACCGACATC ACGCGCCACC TGCGCCGCCG GGACGTGGAT
GCCGCGCTGG CGGCTGCGGG GGCCGAGGCG CAGGACTGGT CCGGCGGGAC ACGGATCGGC
GACTGCCTCC ACGTCTTCAA CCGGGATTGG TCGCGCCGGG TGCTGGGGCA GGGGGCGGTG
GTGCTTCTGA TCACCGACGG GCTCGACCGC GGCGACCCTG TGGCGCTTGC CCGCGAGATG
GAGCGTCTGC ATCTCTCGGC CCGGCGGCTC ATCTGGCTCA ACCCGCTCCT GCGTTGGGAG
GGTTTTGCCC CGCGGGCGGG CGGCATCCGC GCCATGCTGC CCCATGTGGA CAGTCTGCGT
GCGGCTCATT CGGTGGCCTC GCTCGAAGCT CTGGCCGAGG CGCTCTCCCG GCGCTGA
 
Protein sequence
MELQAPADGS LTRNILWFAR ALRKAGLPIG SGRVADAVRA VEATGFTSRE DFYWTLHACF 
VSRPEHRATF AQVFRLFWRD PQFLEQMMSL LLPQLRAAPE DRPPDPAEKR AAEALLDGAP
RPERAAPEPE GSLIEIDAAE TASEQERLKR LDFEQMSTAE MDEARRMLAR LSLPVPPIRS
RRLVAAAGGP RVDLRRTLVR ALRQGGEIPA LARRRRALRW PNLVVLCDIS GSMSRYSRLV
LHFIHAVANR KGQGWARVHA FTFGTRLTDI TRHLRRRDVD AALAAAGAEA QDWSGGTRIG
DCLHVFNRDW SRRVLGQGAV VLLITDGLDR GDPVALAREM ERLHLSARRL IWLNPLLRWE
GFAPRAGGIR AMLPHVDSLR AAHSVASLEA LAEALSRR