Gene Rsph17025_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0324 
SymbolpyrE 
ID5082591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp318570 
End bp319268 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content68% 
IMG OID640481876 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001166535 
Protein GI146276376 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCA CCTCCTTCCC GCCCCGCGAG GAGATCGCGC GCCTGACCGC GCGGATGCTG 
CTCGAGATCC AGGCGGTGCA TTTCCGCCCG CACGAGCCCT TCACCCTCGC CTCGGGCCTG
CCCTCGCCCA CCTACATCGA CTGCCGCAAG CTGATCTCCT ATCCGCGCAT CCGCGCGACG
CTGATGGACT TCCTGACCGT CACGCTGTTG CGCGACGCCG GCTTCGAGGC CTTCGACAAT
GTGGCGGGCG GCGAAACCGC GGGCATCCCC TTCGCGGCGA TGATGGCCGA GCGGCTGGCC
CTGCCGATGA CCTACGTCCG CAAGAAGCCC AAGGGCTACG GTCGCAACGC CCGGATCGAG
GGCGTGATGA CGGAAGGCCA GCGCGTGCTG CTGGTCGAGG ATCTGACCAC GGACGGCGGG
TCGAAACTGT CCTTCGTCGA TGCGATCCGC GACACGGGGG CAACCTGCGC CCACACCGCG
GTGATCTTCT ATTACGGCAT CTTCCCCGAG ACGATCGGGC GGCTTCAGGC CCACGGCGTC
ACGCTGCACC ATCTGTGCAC CTGGTGGGAC GTGCTGGCGG AGGCGCGGGC CTCGGATGCG
TTCGATGCCG GCACGCTGGC CGAGGTCGAG TGCTTCCTGT CGAACCCGCG GGACTGGCAG
GACGCGCGGA AACCAGCCGA TCCGGCCGCC GGTCTCTGA
 
Protein sequence
MIPTSFPPRE EIARLTARML LEIQAVHFRP HEPFTLASGL PSPTYIDCRK LISYPRIRAT 
LMDFLTVTLL RDAGFEAFDN VAGGETAGIP FAAMMAERLA LPMTYVRKKP KGYGRNARIE
GVMTEGQRVL LVEDLTTDGG SKLSFVDAIR DTGATCAHTA VIFYYGIFPE TIGRLQAHGV
TLHHLCTWWD VLAEARASDA FDAGTLAEVE CFLSNPRDWQ DARKPADPAA GL