| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0291 |
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| Symbol | |
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| ID | 5084149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | + |
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| Start bp | 287812 |
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| End bp | 289920 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640481846 |
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| Product | TRAP transporter, 4TM/12TM fusion protein |
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| Protein accession | YP_001166506 |
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| Protein GI | 146276347 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.658932 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCAC AGACCGCCGC ATCGGGGGCG GCCCCTCCCC ACGCACATGC CGAACCCGAA
GTCACCGAGG GCCTGCCGCC CGGCTTCGGA CCCGGCATCA TGGGCCATGT GGCCTTCTGG
ATCGCCGTCG CCTTCTCGCT CTTCCAGCTC TGGACCGCCG GCTACGGCAC CTTGCCGAGC
CAGGTGGTGC GGGCGATGCA TGTGGCCTTT CTGCTGCTGC TGGGCTTCGG GCTGGTCGGC
AACCTGCTTG CCCGGACGGC GCTGACGCGG GCGATCTTCT GGGGGATGGG GCTGATCGGC
TTCGGCACGG GCATCTACAA CTGGGTCTTC TACGAAGAGC TGATCCGGCG GACGGGCTTC
CTGACGCAGG CGGATCTCGT GGTCGGCACG GTGCTGGTGC TCCTGGTCTT CGAGGCGAGC
CGTCGGCTGA TGGGCTGGCC GCTGGCCATC ATCGCCGGGA TCTTCCTGGC CTACTGCTTC
TTCGGCCAGC ATCTTCCCGC GCCCTTCATC CACCGCGGCT ATGACTTCGA GCAGATCGTC
GAGCATTTCG CCTTCGGCAC CGAGGGGATC TACGGCACGC CGGTCTATGT CAGCTCGGCC
TACATCTTCA TCTTCGTGGT CTTCGCGGCC TTCCTCGAGC GGGCGGGGAT GCTGAACCTG
TTCAACGACT TCGCCCTCGG CCTCGTCGGA GGGGTACGGG GCGGGCCGGC GCAGGTGGCG
GTTCTCTCCT CGGCGCTCAT GGGCACGATC TCGGGCTCGG GCGTGGCCAA TGTGGTGGCC
TCGGGGCAGT TCACCATCCC GATGATGAAA CGCTTCGGCT TCAAGCCGGC CTTCGCCGGA
GGCGTCGAGG CCACGGCCTC GATGGGCGGC CAGATCATGC CGCCGGTCAT GGGGGCGGTG
GCCTTCATCA TGGCCGAGAC GCTGAACGTT CCCTATGCGG CCGTGGTGCA GGCGGCGATC
CTGCCCGCGG TCCTCTATTT CGGCGTGGTC TTCTGGATGG TCTGGCTGCA GGCCGGGCGC
GACGGGCTGC GTGGGCTGCC GCGGGCCGAG CTGCCGAACC CCTGGCACGC GGTCCGCGAC
CGGTGGCCGC TGATCCTGCC GCTGGCGGCG CTCGTCTATC TGCTCTTCGC GGGCTACACG
CCCATCTTTG CCGGCACGAT GGGGCTTGCG CTGGTGGCGG TGCTGATCCT CGGCACGCCG
CTCGCCGCCA TGATCGGGCC GACCGCCTTC CGCATGGTCT TCTGGATCGC GCTGGGGCTG
GCCGCGGCGA GCTTCCTCAG GTTCGGGGTC AACTTCCTCG TGCTGGTCAT CGGGGTGCTG
ATCCTGGCCT GCGCCCTCTT CCGGGGCACG CGGCCGACCA TCGGCATCCT GCGGGATGCG
CTGGCGCAGG GCGCGCGGAA CGCGCTTCCG GTGGGCATCG CCTGCGCCGT GGTGGGCATC
GTGATCGGCA CGCTCACCCT GACGGGCATC GCCTCGACCT TCATCGGCGC GATCATCGCC
ATCGGGCGCG AGAACCTCTT CCTGTCGCTC GTGCTGACCA TGATCACCTG CCTCGTGCTC
GGCATGGGTA TCCCGACGAT CCCCAACTAC ATCATCACCT CCTCGCTGGC GGGGCCGGCG
TTGCTCGATC TGGGCGTGCC GCTTCTGGTG AGCCACATGT TCGTCTTCTA TTTCGGCATC
ATGGCGGACC TGACGCCGCC GGTGGCGCTG GCCTGCTTTG CGGCGGGTCC GATCGCCAAG
GCCTCGGGGC TGAAGATCTC GCTGCAGGCG GTGCGGCTGG CGGCGGCGGG CTTCGTGATC
CCCTTCATGG CGGTCTATAC GCCCGCGCTC ATGCTGCAGG ACGGAGGCCC CATCGCCGAG
GCCTGGGGCT ATCCGGTCGA GGTGATCTAC ATCTTCCTCA AGGCGATGCT GGCCATCGGC
CTCTGGGGGG TGGCGGTCGT CGGCCAGTTC ATCGGACGCG CCAACATGTT CGAGCGGGCG
CTGGCGCTGG CGGCGGGCGT GTCGCTGATC CTCGCGATGC CGGTGACGGA CGAGGCGGGC
TTCGGTCTCG CGCTGCTCTT CGCGCTGGTG CACTGGCTGC GCCTGCGCCG CAGCGCGCGG
ACGGCATGA
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| Protein sequence | MSAQTAASGA APPHAHAEPE VTEGLPPGFG PGIMGHVAFW IAVAFSLFQL WTAGYGTLPS
QVVRAMHVAF LLLLGFGLVG NLLARTALTR AIFWGMGLIG FGTGIYNWVF YEELIRRTGF
LTQADLVVGT VLVLLVFEAS RRLMGWPLAI IAGIFLAYCF FGQHLPAPFI HRGYDFEQIV
EHFAFGTEGI YGTPVYVSSA YIFIFVVFAA FLERAGMLNL FNDFALGLVG GVRGGPAQVA
VLSSALMGTI SGSGVANVVA SGQFTIPMMK RFGFKPAFAG GVEATASMGG QIMPPVMGAV
AFIMAETLNV PYAAVVQAAI LPAVLYFGVV FWMVWLQAGR DGLRGLPRAE LPNPWHAVRD
RWPLILPLAA LVYLLFAGYT PIFAGTMGLA LVAVLILGTP LAAMIGPTAF RMVFWIALGL
AAASFLRFGV NFLVLVIGVL ILACALFRGT RPTIGILRDA LAQGARNALP VGIACAVVGI
VIGTLTLTGI ASTFIGAIIA IGRENLFLSL VLTMITCLVL GMGIPTIPNY IITSSLAGPA
LLDLGVPLLV SHMFVFYFGI MADLTPPVAL ACFAAGPIAK ASGLKISLQA VRLAAAGFVI
PFMAVYTPAL MLQDGGPIAE AWGYPVEVIY IFLKAMLAIG LWGVAVVGQF IGRANMFERA
LALAAGVSLI LAMPVTDEAG FGLALLFALV HWLRLRRSAR TA
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