Gene Rsph17025_0286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0286 
Symbol 
ID5084144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp280769 
End bp281761 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content68% 
IMG OID640481841 
Productalcohol dehydrogenase 
Protein accessionYP_001166501 
Protein GI146276342 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases 
TIGRFAM ID[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGA TGAAAGCCCT CGTCTGCGTC GAACCCGGCC GGTTCGAGCA GCAGGACCGC 
CCCCGCCCTG AAGCCAAGCC GGGTCATGTC CGGGTGCGCA TCCTGCAGGT GGGGATCTGC
GGCACCGACT ATCACATCTA TGCCGGTCAT CAGCCGTTCC TGGCCTATCC GCGCATCATG
GGCCACGAAC TGTCCGGCCG GGCGATGGAG CCTTCGGCCG ACGGACGCAT CGCCGAGGGC
GATCTGGTGG TGATCAACCC CTATCTCACC TGTGGCACCT GCCGGGCCTG CCGGGCCGGC
AAGCCCAACT GCTGCGAGAA CATCGCCGTG CTTGGCGTTC ATACCGACGG CGGCATGTGC
GAGGAAATCG TGGTGCCCGA GGTCAACGTC TATTCGGCCG AGGGCCTGAC CGAGCAATCG
GCCGCCATGG TGGAGTTCCT GGCCATCGGT GCGCATGGGG TGCGGCGGGG CGGTGTGCGC
GCGGGGATGT CGGCGCTGGT GGTGGGGGCG GGGCCGATCG GGATCGGGGC TGCGCTCTTC
GCATCGATCG AGGGGGCCGA GGTGACGCTG CGCGACACGT CGGCCTCGCG GCTTGCGCTG
GCGCGGAAGG TTCTGCCGGA GGCCCGGTTC GAGCTGGTCG GGGTCGAGTA CCCCGCCGCC
TACGATGTGG TGTTCGATGC GACGGGCAAC ATCCGGGCCA TGAACGCGGG CCTGCACCAT
GTGGCGCATG GCGGATCCTA TGTGCTGCTC TCGGTGGTGA AGGGCGACCT CTGCTTTGCC
GATCCCGAGT TCCACAAGCG CGAGACCGCC CTCTTTGCCA GCCGGAACGC GCTGAAGGAG
GATTTCGAGC ATGTGATCGC CTGCATCCGC GACGGGCGCG TGCCGGTCGA GGCGCTGGCG
ACGCACGCGA CCGGCTTCGA GGATGCCGTC ACCAACCTGC CCCTCTGGGC CGAGGACCGG
GGCACCCTGA TCAAGGCGAT CATCCGCGTC TGA
 
Protein sequence
MSLMKALVCV EPGRFEQQDR PRPEAKPGHV RVRILQVGIC GTDYHIYAGH QPFLAYPRIM 
GHELSGRAME PSADGRIAEG DLVVINPYLT CGTCRACRAG KPNCCENIAV LGVHTDGGMC
EEIVVPEVNV YSAEGLTEQS AAMVEFLAIG AHGVRRGGVR AGMSALVVGA GPIGIGAALF
ASIEGAEVTL RDTSASRLAL ARKVLPEARF ELVGVEYPAA YDVVFDATGN IRAMNAGLHH
VAHGGSYVLL SVVKGDLCFA DPEFHKRETA LFASRNALKE DFEHVIACIR DGRVPVEALA
THATGFEDAV TNLPLWAEDR GTLIKAIIRV