| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0276 |
|---|
| Symbol | deoA |
|---|
| ID | 5083465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 269979 |
|---|
| End bp | 271286 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640481831 |
|---|
| Product | thymidine phosphorylase |
|---|
| Protein accession | YP_001166491 |
|---|
| Protein GI | 146276332 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0213] Thymidine phosphorylase |
|---|
| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.57515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGACGCGC GTTCGATCAA CGCCAGGCTG CGCCGCGGCG AGGTGCCCTC GGCGGCCGAA
CTCGGCTGGT TCGCGCAGGG GCTTGCCTCG GGCCATGTCA CCGACGCGCA GGCCGGCGCC
TTCGCCATGG CGGTCTGCCT GCAAGGCCTG GGCGAGGAGG GGCGCGTGGC GCTCACCCGC
GCCATGCGCG ACTCGGGCCG GGTGCTCGAA TGGGACCTGC CGGGGCCGGT GCTCGACAAG
CACTCGACAG GCGGGATCGG CGACTGCACC TCGCTGCTGC TGGCGCCCGC GCTCGCCGCC
TGCGGGGCCT ATGTGCCGAT GATCTCGGGC CGGGGGCTCG GCCACACCGG CGGCACGCTG
GACAAGCTCG AGTCGATCCC GGGCTTTCGG GTCGCTCTTG GGGAGGACCG CCTGCGCGGG
CAGATCGAGG ATGTGCGCTG CGCCATCGTC GCCGCCGACG AGAGCATGGC CCCGGCGGAC
CGGCGGCTCT ACCTGATCCG CGACGTGACC GGCACGGTCG AGTCGATCGA CCTCATCACG
GCGTCCATCC TGTCCAAGAA GCTCGCGGCC GGGCTCGAGG GGCTGGTGCT CGATGTGAAG
GTGGGGTCGG GTGCCTTCAT GAAGTCGATG GACGAGGCGG AGGCGCTGGC GCGTGCCCTG
GTGGGCACGG CGCAGGGGGC GGGCTGCATG ACCTCGGCGC TCATCACCGA CATGAGCCAG
CCGCTCGCCA CCGCGGCGGG CAACGCGCTC GAAGTGATCG AGGTGATGGA GACCCTGACC
GGAACCTCGA TCAACGCGGC CCTCTGGGAT GTGACGGTGG CGCTGGGCGG CGAGGCGCTG
GCGCTGGGCG GGCTGGCGGC CGACGCCGAG GATGGCGCGC ACCGGATCGA GCAGGCGCTG
GAAAGCGGCC ACGCCGCCGA ATATTTCGCC CGCATGGTGG CGGCGCAGGG CGGGCCCGTC
GATTTCGTCG AGCGATGGCC CGACCGGCTG CCCTCGGCCC CGGTAATGCG CGAGGTGCCC
AGCCTGCGCA CGGGGTTCGT GCTGCGGATC GACACGGCGG CGCTGGGCCA GGCGGTCGTG
CGGCTCGGCG GGGGCAGGCT GCGTGAAACC GATCGGGTGA ATCCCTCGGT GGGCCTCGCC
GACATTGCGG GGATCGGCGA GGAAGTGTCC GAGGACCTGC CGCTCGCGAT GGTCCATGCC
GCCACCGAAG CGGATGCCGA GGCGGCGATC TCGGCGATTC AGGCGGCCTA TGTGATCTCG
GATCAGGAGC CGGCCGAACC GCCGCTCATT CATGCGAGGA TCGCCTGA
|
|---|
| Protein sequence | MDARSINARL RRGEVPSAAE LGWFAQGLAS GHVTDAQAGA FAMAVCLQGL GEEGRVALTR
AMRDSGRVLE WDLPGPVLDK HSTGGIGDCT SLLLAPALAA CGAYVPMISG RGLGHTGGTL
DKLESIPGFR VALGEDRLRG QIEDVRCAIV AADESMAPAD RRLYLIRDVT GTVESIDLIT
ASILSKKLAA GLEGLVLDVK VGSGAFMKSM DEAEALARAL VGTAQGAGCM TSALITDMSQ
PLATAAGNAL EVIEVMETLT GTSINAALWD VTVALGGEAL ALGGLAADAE DGAHRIEQAL
ESGHAAEYFA RMVAAQGGPV DFVERWPDRL PSAPVMREVP SLRTGFVLRI DTAALGQAVV
RLGGGRLRET DRVNPSVGLA DIAGIGEEVS EDLPLAMVHA ATEADAEAAI SAIQAAYVIS
DQEPAEPPLI HARIA
|
|---|
| |