Gene Rsph17025_0275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0275 
Symbol 
ID5083464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp269585 
End bp269977 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content72% 
IMG OID640481830 
Productcytidine deaminase 
Protein accessionYP_001166490 
Protein GI146276331 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0295] Cytidine deaminase 
TIGRFAM ID[TIGR01354] cytidine deaminase, homotetrameric 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGC TCGAAGCCGC CACGGCGGTC CGCGAGAACG CCTATGCCCC CTATTCCCGC 
TTCAAGGTCG GGGCGGCGCT GCGCACGGCC TCGGGCACCG TCCATGCGGG CTGCAATGTC
GAGAATGTGG CCTACCCCGA GGGCACCTGC GCCGAGGCCG GCGCCATCGC CGCCATGGTG
GCCGCGGGCG AGACGCGGAT CGCCGAGATG GTCGTGATCG CCGACAGCCC TGACCCTGTG
CCCCCCTGCG GCGGCTGCCG CCAGAAGATC GCCGAATTCG CCGCGCCCGA GGTGCCTGTC
ACGCTCTGCA CCACCGACGG CCAGAGCCTG CGGACCACGG TCGCCGATCT GCTGCCCGGA
GTGTTCCGCG CCGCGCATAT GGACAGGGCC TGA
 
Protein sequence
MSLLEAATAV RENAYAPYSR FKVGAALRTA SGTVHAGCNV ENVAYPEGTC AEAGAIAAMV 
AAGETRIAEM VVIADSPDPV PPCGGCRQKI AEFAAPEVPV TLCTTDGQSL RTTVADLLPG
VFRAAHMDRA