| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0243 |
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| Symbol | |
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| ID | 5083791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 236406 |
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| End bp | 237410 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640481798 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_001166458 |
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| Protein GI | 146276299 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.68062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.883791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTCC GTCGCAACCT TGCCGTGCTG GCAGGGTCGG CCGCGCTTGC GCTCGCCGCA
GCCCTGCCGG CGCTGGCCCA GCCGATCGTG ATCAAGTTCA GCCACGTCGT CGCCCCCGAC
ACGCCGAAGG GCAAGGGCGC GGCAAAGTTC GAGGAGCTGG CCGAACGCTA CACCGACGGC
GCCGTCGATG TCGAAGTCTA TCCCAACAGC CAGCTCTACA AGGACAAGGA AGAGCTTGAG
GCCCTGCAAC TGGGCGCGGT GCAGATGCTC GCCCCGTCGC TGGCCAAGTT CGGCCCGCTC
GGCGTGCAGG ATTTCGAGGT CTTCGACCTG CCCTACATCT TCAAGGGCTA TGACGCGCTG
CATACCGTGA CCCGCGGAGA AGTCGGCCGG ATGCTGTTCT CCAAGCTCGA GGACAAGGGC
ATCAAGGGCC TCGCCTACTG GGACAACGGC TTCAAGGTCA TGTCGGCCAA CAGCCCGATC
GCGACGCCCG ATGATTTCCT CGGGCTCAAG ATGCGGATCC AGTCCTCGAA GGTGCTCGAG
GCGCAGATGA ACGCGCTCGG CGCCGTGCCG CAGGTCATGG CCTTCTCGGA GGTCTATCAG
GCGCTGCAGA CGGGTGTGGT GGACGGCACC GAGAACCCGC CCTCGAACAT GTTCACCCAG
AAGATGCACG AGGTCCAGAA GCACGCCACC GTGTCGAACC ACGGCTACCT CGGCTATGCG
GTGATCGTGA ACAAGCAGTT CTGGGACGGC CTGCCCGAGG ACGTGCGCGC CGGTCTCGAG
ACGGCGCTCG ACGAAGCGAC CGACTATGCC AACTCGATCG CCAAGGAAGA GAACGACGCG
GCCCTTCAGG CGATGAAGGA CGCCGGCACG ACCGAGTTCC ACGAGCTGAG CCCCGAAGAG
CTTGCCGCGT GGGAAGAGGC GCTCGCCCCG GTCCATGAGG ACATGGCCGG CCGCATCGGC
GCCGAGACCA TCGCCGCCGT CAAGGCCGCA GCCGCCGGCC ACTGA
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| Protein sequence | MTFRRNLAVL AGSAALALAA ALPALAQPIV IKFSHVVAPD TPKGKGAAKF EELAERYTDG
AVDVEVYPNS QLYKDKEELE ALQLGAVQML APSLAKFGPL GVQDFEVFDL PYIFKGYDAL
HTVTRGEVGR MLFSKLEDKG IKGLAYWDNG FKVMSANSPI ATPDDFLGLK MRIQSSKVLE
AQMNALGAVP QVMAFSEVYQ ALQTGVVDGT ENPPSNMFTQ KMHEVQKHAT VSNHGYLGYA
VIVNKQFWDG LPEDVRAGLE TALDEATDYA NSIAKEENDA ALQAMKDAGT TEFHELSPEE
LAAWEEALAP VHEDMAGRIG AETIAAVKAA AAGH
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