| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0241 |
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| Symbol | |
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| ID | 5083789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 234353 |
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| End bp | 235678 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640481796 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001166456 |
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| Protein GI | 146276297 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.300698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.23963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAG CCCTCATCTT CGGCGGTCTC ATCGCCCTGA TGCTCACCGG CATGCCGATC
TCGATCGCGC TCGGCCTGAC GGTGCTGACC TTCCTCTTCA CCATGACCAC GGTGCCGATC
GACACGGTGG CGCTCAAGCT CTTCACCGGG ATCGAGAAGT TCGAGATCAT GGCGATCCCG
TTCTTCATCC TCGCCGGCAA CTTCCTGACC CACGGCGGGG TCGCCAAGCG GATGATCAAC
TTTGCCACCG CGATGGTCGG CCACTGGCAC GGCGGCCTCG GGCTCGGTGG CGTCTTTGCC
TGCGCGCTCT TTGCGGCCGT GTCGGGGTCT TCGCCCGCCA CGGTGGTCGC CATCGGCTCG
GTCATCCTTC CGGCCATGGT GGCGCAGGGC TTCCCCACCC GGTTCGGCGC GGGCGTCATC
ACCACGAGCG GCGCGCTCGG GATCCTGATC CCGCCGTCGA TCGTGATGGT GATGTATTGC
GTGGCCACCT CGGGGATGCT GGTCGAGGGG CCGGACGGCC GGATCGTCGA TGCCGCCTCG
GTGGGCGAGA TGTTCATCGC GGGCGTCATT CCCGGCATGA TGCTGGCGGG CCTTCTGGCG
CTGACCACCT GGTATCGCGC CCGCAAGTTC GGCTATCCGC GCCTCGCGAA GGCCAGCTGG
GCCGCGCGTT GGCAGGCGTT CCGCCGCGCG ATCTGGGGGC TTCTGCTGAT CTTCGTCGTG
ATGGGCGGGA TCTACAGCGG CACCTTCACC CCCACCGAAG CCGCCGCGAT GAGCGCCGTC
TATGCCTTCG TGATCGCCGT CTTCGTCTAC AAGGACATGA CGCTTCGCGA CGTGCCGCGG
GTGCTGCTGC AATCGGCCAA CATGTCGGCC ATGCTGCTCT ACATCATCAC CAACGCGGTG
CTGTTCAGCT TCCTGCTCAC GCACGAGAAC ATCCCGCAGG CGCTGGGGCA GTGGATGGTG
GATTCGGGCC TGACCTGGTG GATGTTCCTG ATCGCGGTGA ACATCATCCT GCTTATGGCC
GGCAATTTCA TGGAGCCCTC GTCGATCGTG CTGATCATGG CGCCGATCCT GTTCCCGGTC
GCGGTGCGCC TTGGCATCGA CCCGGTGCAT TTCGGGATCA TGATCATCGT GAACATGGAG
GTGGGCATGT GCCACCCGCC TGTGGGCCTG AACCTCTATG TGGCCTCGGG GATCACCCGG
ATGGGCATCA CCGAACTGAC CGTCGCGGTC TGGCCCTGGC TGCTCACGAT GCTGGGCTTT
CTCCTGCTCG TGACCTACGT GCCGCAGATC TCGCTGTTCC TGCCGCAACT GCTCGGGATG
CACTGA
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| Protein sequence | MNAALIFGGL IALMLTGMPI SIALGLTVLT FLFTMTTVPI DTVALKLFTG IEKFEIMAIP
FFILAGNFLT HGGVAKRMIN FATAMVGHWH GGLGLGGVFA CALFAAVSGS SPATVVAIGS
VILPAMVAQG FPTRFGAGVI TTSGALGILI PPSIVMVMYC VATSGMLVEG PDGRIVDAAS
VGEMFIAGVI PGMMLAGLLA LTTWYRARKF GYPRLAKASW AARWQAFRRA IWGLLLIFVV
MGGIYSGTFT PTEAAAMSAV YAFVIAVFVY KDMTLRDVPR VLLQSANMSA MLLYIITNAV
LFSFLLTHEN IPQALGQWMV DSGLTWWMFL IAVNIILLMA GNFMEPSSIV LIMAPILFPV
AVRLGIDPVH FGIMIIVNME VGMCHPPVGL NLYVASGITR MGITELTVAV WPWLLTMLGF
LLLVTYVPQI SLFLPQLLGM H
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