Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0216 |
Symbol | |
ID | 5082155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 209595 |
End bp | 210368 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640481771 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_001166431 |
Protein GI | 146276272 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGATG CGAAAGTCAG GCTCTATGTA GATCAGCCCC TCGGACCCGG GCAACCCGTT CGTCTGACGC AGGATCAGGC GCATTACCTC TTCGGGGTGA TGCGACTGGC GCGCGGCGCG GCGGTGCTGC TGTTCAACGG GCGGGATGGC GAGTGGCGCG CCGAGGTGAC CGAGGCGGGC AAGCGCGGCG GCACGCTCAC CTGCGCGGCG CAGACGGCAC CGCTGCGCCG GCCGCCGGAC CTCTGGCTGA TGTTCGCGCC GATCAAGAAG GCGCGCACGG ATTTCATCGT GGAAAAGGCG GCCGAAATGG GCGCCGCGCG CATCCTGCCC GTGCAGACCC GCTTCACCAA CTCCGAACGC ATCCGGCAGG ATCGCCTTCA GGCCCACGCG GTCGAGGCGG CCGAGCAGTG CGGCGGCACC TATGTCCCCG AGGTGGCCGA ACTGGCCGCC CTCGACCGGC TTCTGTCCGG CTGGCCCGCG GATCGGCGGA TCATGTGGTG CGACGAGAAC CTGCTCGGCG CGCGGGCGGG GCTGCTTGAA GGGGCGGGCG CGATCGAGGC CCGCGGCTTC GAGGAGGCGC CCAGCCAGCC CTCGCCGGGC CCGTGGGCCA TCCTCATCGG CCCGGAAGGC GGCTTCTCCG AGGACGAGCA GGCGCGCCTG CGCCGGATGC CGCAGGTCGT GCCGGTCAGC CTCGGCCCGC GCATCCTGCG CGCCGATACG GCCGCGGTGG CGGCGCTGAC GCTCTGGCAG TCCGTGCTGG GGGACTGGGT GTGA
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Protein sequence | MSDAKVRLYV DQPLGPGQPV RLTQDQAHYL FGVMRLARGA AVLLFNGRDG EWRAEVTEAG KRGGTLTCAA QTAPLRRPPD LWLMFAPIKK ARTDFIVEKA AEMGAARILP VQTRFTNSER IRQDRLQAHA VEAAEQCGGT YVPEVAELAA LDRLLSGWPA DRRIMWCDEN LLGARAGLLE GAGAIEARGF EEAPSQPSPG PWAILIGPEG GFSEDEQARL RRMPQVVPVS LGPRILRADT AAVAALTLWQ SVLGDWV
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