Gene Rsph17025_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0216 
Symbol 
ID5082155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp209595 
End bp210368 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content72% 
IMG OID640481771 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_001166431 
Protein GI146276272 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGATG CGAAAGTCAG GCTCTATGTA GATCAGCCCC TCGGACCCGG GCAACCCGTT 
CGTCTGACGC AGGATCAGGC GCATTACCTC TTCGGGGTGA TGCGACTGGC GCGCGGCGCG
GCGGTGCTGC TGTTCAACGG GCGGGATGGC GAGTGGCGCG CCGAGGTGAC CGAGGCGGGC
AAGCGCGGCG GCACGCTCAC CTGCGCGGCG CAGACGGCAC CGCTGCGCCG GCCGCCGGAC
CTCTGGCTGA TGTTCGCGCC GATCAAGAAG GCGCGCACGG ATTTCATCGT GGAAAAGGCG
GCCGAAATGG GCGCCGCGCG CATCCTGCCC GTGCAGACCC GCTTCACCAA CTCCGAACGC
ATCCGGCAGG ATCGCCTTCA GGCCCACGCG GTCGAGGCGG CCGAGCAGTG CGGCGGCACC
TATGTCCCCG AGGTGGCCGA ACTGGCCGCC CTCGACCGGC TTCTGTCCGG CTGGCCCGCG
GATCGGCGGA TCATGTGGTG CGACGAGAAC CTGCTCGGCG CGCGGGCGGG GCTGCTTGAA
GGGGCGGGCG CGATCGAGGC CCGCGGCTTC GAGGAGGCGC CCAGCCAGCC CTCGCCGGGC
CCGTGGGCCA TCCTCATCGG CCCGGAAGGC GGCTTCTCCG AGGACGAGCA GGCGCGCCTG
CGCCGGATGC CGCAGGTCGT GCCGGTCAGC CTCGGCCCGC GCATCCTGCG CGCCGATACG
GCCGCGGTGG CGGCGCTGAC GCTCTGGCAG TCCGTGCTGG GGGACTGGGT GTGA
 
Protein sequence
MSDAKVRLYV DQPLGPGQPV RLTQDQAHYL FGVMRLARGA AVLLFNGRDG EWRAEVTEAG 
KRGGTLTCAA QTAPLRRPPD LWLMFAPIKK ARTDFIVEKA AEMGAARILP VQTRFTNSER
IRQDRLQAHA VEAAEQCGGT YVPEVAELAA LDRLLSGWPA DRRIMWCDEN LLGARAGLLE
GAGAIEARGF EEAPSQPSPG PWAILIGPEG GFSEDEQARL RRMPQVVPVS LGPRILRADT
AAVAALTLWQ SVLGDWV