Gene Rsph17025_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0197 
Symbol 
ID5082136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp186581 
End bp187225 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content67% 
IMG OID640481752 
Productendonuclease III 
Protein accessionYP_001166412 
Protein GI146276253 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCC AACTCGATTA CCGCACGATC CACGAGATCT TCACCCGCCT CCATGCGCTG 
GAGCCGGAGC CGAAAGGCGA GCTTGAACAT GTGAACGCCT ACACGCTGCT CGTGGCGGTG
GCGCTGTCGG CGCAGGCGAC GGATGCCGGG GTGAACAAGG CCACGCGCGC GCTCTTTGCC
CGGGTGACGA CGCCCGCCCA GATGCTGGAG CTGGGCGAGG AGGGGCTGAC CGAGCATATC
CGCACCATCG GCCTCTACCG CAACAAGGCG AAGAACGTGA TCGCGCTGAG CCGCCTGCTC
GTCGATCACT ACGACGGCGA GGTGCCCGCG TCGCGCGCGG CGCTCCAGTC GCTGCCGGGG
GTGGGGCGGA AGACGGCGAA TGTGGTGCTG AACATGTGGT TCCACCAGCC GGCGATGGCG
GTGGACACGC ACATCTTCCG CGTGGCCAAC CGCACCGGCA TCGCGCCCGG CCGCGATGTC
GAGGCGGTCG AGCGGGCGCT CGAGGATCAT GTGCCCGCGC CCTTCGCGCT GCATGCGCAC
CACTGGCTCA TCCTGCACGG CCGCTACATC TGCGTCGCGC GCAAACCGAA ATGCGGCATC
TGCCCGATCC GCGATCTCTG CCTTTACGAG GACAAGACAG CATGA
 
Protein sequence
MARQLDYRTI HEIFTRLHAL EPEPKGELEH VNAYTLLVAV ALSAQATDAG VNKATRALFA 
RVTTPAQMLE LGEEGLTEHI RTIGLYRNKA KNVIALSRLL VDHYDGEVPA SRAALQSLPG
VGRKTANVVL NMWFHQPAMA VDTHIFRVAN RTGIAPGRDV EAVERALEDH VPAPFALHAH
HWLILHGRYI CVARKPKCGI CPIRDLCLYE DKTA