Gene Rsph17025_0151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0151 
Symbol 
ID5082559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp153202 
End bp154110 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content72% 
IMG OID640481706 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_001166367 
Protein GI146276208 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.338305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTGG TCTTCATGGG CTCGCCCGAC TTCTCGGTTC CCGTGCTCGA GGCGCTGCAC 
GCCCATCACG AGGTCGTCTG CGTCTATTGC CAGCCGCCCC GGCCCGCGGG GCGGGGGAAG
AAGGACCGGC CGACGCCGGT GCAGGCCCGT GCCGAAGAGC TGGGCCTGCC CGTGCGTCAC
CCGAAATCGC TGCGCACGCC CGAGGTGCAG GCCGACTTCG CGGCGCTCGG GGCCGAGGTG
GCGGTGGTCG TGGCCTACGG GCTGATCCTG CCGCAACCGA TCCTCGATGC GCCGGACCGC
GGCTGCCTGA ACATCCATGC CTCGCTGCTG CCGCGCTGGC GGGGGGCGGC GCCGATCCAC
CGCGCGATCC TTGCGGGGGA CGATGAGACC GGCATCTGCA TCATGCAGAT GGAGGCCGGG
CTCGACACCG GGCCGGTGCT GATGTGCGAA AAGACCCACA TCGGCGCCGA AGACACGGTG
CAGGATCTGC ATGACCGGCT GTCCGGCATG GGGGCGCGGC TGATCCTCGG CGCGATCGAG
GCGCTCGACG ATCTCGTGCC GCAGCCGCAG CCCGAAGAGG GCGTCACCTA TGCCGAGAAG
ATCGCCAAGG CCGAGGCGGG CATCGACTGG AGTCGCCCGG CAGCGGAGAT CGACCGGCAG
ATCCGTGGCC TCTCGCCATT CCCCGGCGCC TGGACGATGC TGGGCGGCGA GCGGGTCAAG
CTCTTGCGCT GCCGGCTGGC CGAGGGGCAG GGCGCTCCGG GCGAGCTGCT CGAGGGGCTC
GTGATCGCCT GCGGCTCGGG CGCGGTCGAG ATCACGCTCG CGCAGCGCGA GGGCAAGCGC
CCGATGGAGC GCGACGAGTT CCTGCGCGGC TTTGCGCTGC CCAGGGGCAG CCTCGCCACG
GCGTCCTGA
 
Protein sequence
MRVVFMGSPD FSVPVLEALH AHHEVVCVYC QPPRPAGRGK KDRPTPVQAR AEELGLPVRH 
PKSLRTPEVQ ADFAALGAEV AVVVAYGLIL PQPILDAPDR GCLNIHASLL PRWRGAAPIH
RAILAGDDET GICIMQMEAG LDTGPVLMCE KTHIGAEDTV QDLHDRLSGM GARLILGAIE
ALDDLVPQPQ PEEGVTYAEK IAKAEAGIDW SRPAAEIDRQ IRGLSPFPGA WTMLGGERVK
LLRCRLAEGQ GAPGELLEGL VIACGSGAVE ITLAQREGKR PMERDEFLRG FALPRGSLAT
AS