| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0140 |
|---|
| Symbol | |
|---|
| ID | 5082548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides ATCC 17025 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009428 |
|---|
| Strand | + |
|---|
| Start bp | 141340 |
|---|
| End bp | 142467 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640481695 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_001166356 |
|---|
| Protein GI | 146276197 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.42287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGACGTG CTGCTGAGAA AATGAGCCGG AAGCGCAATC CGTTCCCAGG CGTGACCAAG
GTCGTGGATC GCCACGGCAA GGTTCGGTGG CGCTTCCGCA AGAAGGACCG GGCAGACGTG
TATCTGCCCG GCCCCTACGC CTCGGCCGCA TTCCGAGCCG CCTACGAAGC GGCAGTCGCA
GGAGCCGCTA CACCAGCGGC CCGTTCGACT GCCGCTTACG GCTCTCTCGC TTGGCTGATC
GAAACATACC TTACCAGTCC CCGTTTTCAG AACCTCTCGG AGACGCGTCG GAAACGTCTT
CGACCGGATC TCGATTGGCT GAGGGAGAAC GCCGGCAAGC TTCCGTTCAA TCGGTTGGCG
ACCAGGCATG TAGAAGCGCT CATGGCCAAG AAGGCCGGCC CTTGGGCGGC CAACATGATC
AAAAAGGCTC TCTCGCTTCT TTTCAACTAC GCGATCAAGA ACGAGATCTG CGACCAGAAG
CACAATCCTG CCACCTTGGC AGACCGCAGA AAGGTGAACC CGGACGGTTG GCACGCCTGG
ACAAGTGCCG AGATCGCTCA GTTCCTCGCA TATCATGGCG AGGGAACGCC GCAGCGTCTG
GCATGCCTGC TTATTCTCAA CACCGGAGCG GCACGAGGCG ACCTGATCCG CTTGGGCTGG
CAAAACGTCA ACGGCGGCAG GATCAGATAT CGGCGGCGCA AGAGCGAGGT TATCGGAGAT
TACGAAATCC TCCCCGAATT GGCAGCGGAG CTTCGCCACG TTCCGCCCGC CCAGATGCTG
TTTCTGATGC TGAACGGGCG TCCGTTTAAG CCTGATAGCT TCACCGACTG GTTTAAGCGC
GCATGTGTCG CTGCGGGGCT TCCACATTGC TCAGCGCACG GCGTGCGCAA GGGGCAAGCC
ACCAATATAG CCGACAGCGG CGGGTCCGAA TGGGAAGTCA TGTCGTTTCT CGCCCATGCA
ACCCCGCACG AGGCAGCAAC CTACACAAAG AAGGCCAATC GAGGCCGCCT CGCAGATAGC
GGTTTGGGTA GACTTTCGGG GGCGAAAGCG GAACAGAAGT TGTCCAACCT CAGCAACAGG
TTGGACAAAT CGAAGGCGCA AGGCGTTGTT GCAAAAGGAG AAAAGTAG
|
|---|
| Protein sequence | MRRAAEKMSR KRNPFPGVTK VVDRHGKVRW RFRKKDRADV YLPGPYASAA FRAAYEAAVA
GAATPAARST AAYGSLAWLI ETYLTSPRFQ NLSETRRKRL RPDLDWLREN AGKLPFNRLA
TRHVEALMAK KAGPWAANMI KKALSLLFNY AIKNEICDQK HNPATLADRR KVNPDGWHAW
TSAEIAQFLA YHGEGTPQRL ACLLILNTGA ARGDLIRLGW QNVNGGRIRY RRRKSEVIGD
YEILPELAAE LRHVPPAQML FLMLNGRPFK PDSFTDWFKR ACVAAGLPHC SAHGVRKGQA
TNIADSGGSE WEVMSFLAHA TPHEAATYTK KANRGRLADS GLGRLSGAKA EQKLSNLSNR
LDKSKAQGVV AKGEK
|
|---|
| |