Gene Rsph17025_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0118 
Symbol 
ID5082526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp120533 
End bp122899 
Gene Length2367 bp 
Protein Length788 aa 
Translation table11 
GC content69% 
IMG OID640481673 
Product1A family penicillin-binding protein 
Protein accessionYP_001166334 
Protein GI146276175 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAGAG GATTCAAAGC CACTTCACCT CCACATTCGC GGCCCCTGCG GGTAGAGTCG 
CGCAAAGGTC CACAAGAGCC AGAAGGCGGG CAACGAGGCA TGAGCGGGTC GAACGGGCGG
CGTCCGCCGC TGGTCGCGGA CAGGCGCTAC GGCGCGCCGG CGGCGAAGAA GACGACATCG
AAGGGCGGCG GCGGCGGGCG GGGCGCGAAG CCTCCGCCCA AGTCAACGCC TCGGCGGCGG
CCCCGCAAGC GCGATCCGCT CTCGGCGGCA GTAGCTTGGG TGCTCGGGCT GATCTGGGGG
ATCGTGATGT TCTTCTGGCG CATCCTGTGG GGTGTGGGCT GGCGCATCGC CGCGGTGGTG
GGCCTCGTTC TGGGGCTCTC GGCCTATTAC TTCTACTCGC AGCTTCCCGA GGTGACGCAG
CTCGTGGACG GCCGTGCCCG CGGCTCGGTC ACCATGCTCG ACCGCGAGGG CAAGGTCTTT
GCCTGGCGCG GCGAGACCTA CGGCGGCCTC GTCACCTCCG ACAAGGTCTC GGAACATCTG
CGCGAGGCCG TCGTGGCGAC CGAGGACCGC CGCTTCTACC GGCATTTCGG CATCAGCCCC
CGCGGCATCG CCTCGGCGGT CAGGATCAAC CTGGCCGAGG GGCGCGGCCC GCTTGAGGGC
AACGGCGGCT CGACGATCAC CCAGCAGGTG GCCAAGCTCC TCTGTCTCGG GGTGCAGTAC
GATCCGCAAC AGTGGAAGAG CGAGGCCGAC TATGAGGCGG ACTGCCGCCG GGGCGGCATC
TGGCGGAAGG TGAAGGAAGT GCCCTTCTCC CTCGCGATGG AGGCCAAGTA CACCAAGGCC
GAGATCCTGA CGATCTACTT CAACCGCGCC TATCTGGGGG CTGGCGCACG CGGCTTCGAG
GCGGCGGCGC AGCGTTACTT CGGCAAGTCC GCAAGCCAGG TGAACGCGGC CGAGGCGGCA
ATGCTGGCGG GCCTGCTCAA GGCGCCGTCC TACTACGCTC CGACGGCGAA CCTTCAGCGG
GCGCGCGACC GGGCAAATGT CATCATCGGT CTCATGGAAG AGCAGGGCTA CCTGACGCGC
GCCGAGGCCG AGCAGGCGCG GCGCAATCCG GCCCAGCTCT CCGAGGCGGC CCAGAGCCGG
TCCGGCGGCT TCTTTGCCGA TTGGGTGATG GAATCGGGCC CCGCTTTCCT CACGCGCGAC
ACGACCGAGG ACGTGATCAT CCGCACCACC CTCGACCAGC GGCTGCAGAA AGCCGCCGAA
GGTGCGCTCG CCGATGTCTT CAAGTCCAAG GTGAGCGAAG GCTCCAAGGC GCAGGCGGCC
GTTGTCGTGA TGTCGGCCGA CGGCGCGGTG CGCGCGATGG TCGGAGGCCG GAAGCTCGAG
GCCGCGGGCT CGTTCAACCG GGCGACGCAG GCGCTCCGCC AGACCGGCTC GGCCTTCAAG
CCCTTCATCT ATGCGGCTGC GATGGATCTC GGCTACAGCC CGGCGGATTT CGTGGACGAC
AGCCCGCTCA CCGTCATGGT GAAGGGCTCC GGCCCCTGGA CGCCCGCGAA CTACGACCGG
AAGTTCCGCG GGATCGTGAC GCTGACCGCG GCCCTGAAAC AGTCGCTGAA CATTCCGGCG
GTGCGGATCA CCGAGGCCGT GGGCCGCGAC AAGGTCCGTC AGGTCGCCTC GGAGTTCGGC
ATCCAGAGCA ACCTTGCCGC CGGCCCCGCC CTCGCGCTCG GCGTCTCGGA AGCCACGCTC
ATCGAGATGA CGGGCGCCTA TGCCGGCATC CTCAACGGCG GCTCGGCCGT CAAGCCCTAT
GGACTCGTGG AACTGCGGCT TCAGGGCGAG GACACGCCGC TCATCGGGCA GGAAGGCGGC
ATCGGCGAGC GGGTGATCTC CGAACAGGCG GCGCAGCTTC TGACCTACAT GATGACCGAG
GTCATCAACA GCGGCACGGG CACCCGCGCC CGCCTGCCCG ACCGCGAGGC CGCGGGCAAG
ACGGGCACGA CGCAGGCTGC GCGCGACGCA TGGTTCGTCG GCTTCACCGC CGACTATGTG
GCCGGCGTCT GGATGGGCTA TGACGACAAC ACACCGCTCA AGGGCGTGAC CGGCGGGGGA
CTGCCGGCCG AGATCTGGCG CGAGGTGATG GTCCGGGTGC ACGAGGGCGT GCCCCCTGCC
CCGTTGCGCA AGATCGTGCC CGAGCCCCGG CTGCCGCCCC AGTCCACGGC CGACGTCCGT
ACAGAACCCG TGCCGCAGGA TACGGGCGAC TGGCAGGCCG CCCGGCCGCG GGACACGGGC
GACTGGCAGG CTGCACCCCG TCAGCCGAGC GCCGGCGAAC AGATCGTGCG GGACGTGCTC
GGGATCTTCG GCGGCGGCCG CAACTGA
 
Protein sequence
MRRGFKATSP PHSRPLRVES RKGPQEPEGG QRGMSGSNGR RPPLVADRRY GAPAAKKTTS 
KGGGGGRGAK PPPKSTPRRR PRKRDPLSAA VAWVLGLIWG IVMFFWRILW GVGWRIAAVV
GLVLGLSAYY FYSQLPEVTQ LVDGRARGSV TMLDREGKVF AWRGETYGGL VTSDKVSEHL
REAVVATEDR RFYRHFGISP RGIASAVRIN LAEGRGPLEG NGGSTITQQV AKLLCLGVQY
DPQQWKSEAD YEADCRRGGI WRKVKEVPFS LAMEAKYTKA EILTIYFNRA YLGAGARGFE
AAAQRYFGKS ASQVNAAEAA MLAGLLKAPS YYAPTANLQR ARDRANVIIG LMEEQGYLTR
AEAEQARRNP AQLSEAAQSR SGGFFADWVM ESGPAFLTRD TTEDVIIRTT LDQRLQKAAE
GALADVFKSK VSEGSKAQAA VVVMSADGAV RAMVGGRKLE AAGSFNRATQ ALRQTGSAFK
PFIYAAAMDL GYSPADFVDD SPLTVMVKGS GPWTPANYDR KFRGIVTLTA ALKQSLNIPA
VRITEAVGRD KVRQVASEFG IQSNLAAGPA LALGVSEATL IEMTGAYAGI LNGGSAVKPY
GLVELRLQGE DTPLIGQEGG IGERVISEQA AQLLTYMMTE VINSGTGTRA RLPDREAAGK
TGTTQAARDA WFVGFTADYV AGVWMGYDDN TPLKGVTGGG LPAEIWREVM VRVHEGVPPA
PLRKIVPEPR LPPQSTADVR TEPVPQDTGD WQAARPRDTG DWQAAPRQPS AGEQIVRDVL
GIFGGGRN