Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rsph17025_0118 |
Symbol | |
ID | 5082526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodobacter sphaeroides ATCC 17025 |
Kingdom | Bacteria |
Replicon accession | NC_009428 |
Strand | - |
Start bp | 120533 |
End bp | 122899 |
Gene Length | 2367 bp |
Protein Length | 788 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640481673 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_001166334 |
Protein GI | 146276175 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGAGAG GATTCAAAGC CACTTCACCT CCACATTCGC GGCCCCTGCG GGTAGAGTCG CGCAAAGGTC CACAAGAGCC AGAAGGCGGG CAACGAGGCA TGAGCGGGTC GAACGGGCGG CGTCCGCCGC TGGTCGCGGA CAGGCGCTAC GGCGCGCCGG CGGCGAAGAA GACGACATCG AAGGGCGGCG GCGGCGGGCG GGGCGCGAAG CCTCCGCCCA AGTCAACGCC TCGGCGGCGG CCCCGCAAGC GCGATCCGCT CTCGGCGGCA GTAGCTTGGG TGCTCGGGCT GATCTGGGGG ATCGTGATGT TCTTCTGGCG CATCCTGTGG GGTGTGGGCT GGCGCATCGC CGCGGTGGTG GGCCTCGTTC TGGGGCTCTC GGCCTATTAC TTCTACTCGC AGCTTCCCGA GGTGACGCAG CTCGTGGACG GCCGTGCCCG CGGCTCGGTC ACCATGCTCG ACCGCGAGGG CAAGGTCTTT GCCTGGCGCG GCGAGACCTA CGGCGGCCTC GTCACCTCCG ACAAGGTCTC GGAACATCTG CGCGAGGCCG TCGTGGCGAC CGAGGACCGC CGCTTCTACC GGCATTTCGG CATCAGCCCC CGCGGCATCG CCTCGGCGGT CAGGATCAAC CTGGCCGAGG GGCGCGGCCC GCTTGAGGGC AACGGCGGCT CGACGATCAC CCAGCAGGTG GCCAAGCTCC TCTGTCTCGG GGTGCAGTAC GATCCGCAAC AGTGGAAGAG CGAGGCCGAC TATGAGGCGG ACTGCCGCCG GGGCGGCATC TGGCGGAAGG TGAAGGAAGT GCCCTTCTCC CTCGCGATGG AGGCCAAGTA CACCAAGGCC GAGATCCTGA CGATCTACTT CAACCGCGCC TATCTGGGGG CTGGCGCACG CGGCTTCGAG GCGGCGGCGC AGCGTTACTT CGGCAAGTCC GCAAGCCAGG TGAACGCGGC CGAGGCGGCA ATGCTGGCGG GCCTGCTCAA GGCGCCGTCC TACTACGCTC CGACGGCGAA CCTTCAGCGG GCGCGCGACC GGGCAAATGT CATCATCGGT CTCATGGAAG AGCAGGGCTA CCTGACGCGC GCCGAGGCCG AGCAGGCGCG GCGCAATCCG GCCCAGCTCT CCGAGGCGGC CCAGAGCCGG TCCGGCGGCT TCTTTGCCGA TTGGGTGATG GAATCGGGCC CCGCTTTCCT CACGCGCGAC ACGACCGAGG ACGTGATCAT CCGCACCACC CTCGACCAGC GGCTGCAGAA AGCCGCCGAA GGTGCGCTCG CCGATGTCTT CAAGTCCAAG GTGAGCGAAG GCTCCAAGGC GCAGGCGGCC GTTGTCGTGA TGTCGGCCGA CGGCGCGGTG CGCGCGATGG TCGGAGGCCG GAAGCTCGAG GCCGCGGGCT CGTTCAACCG GGCGACGCAG GCGCTCCGCC AGACCGGCTC GGCCTTCAAG CCCTTCATCT ATGCGGCTGC GATGGATCTC GGCTACAGCC CGGCGGATTT CGTGGACGAC AGCCCGCTCA CCGTCATGGT GAAGGGCTCC GGCCCCTGGA CGCCCGCGAA CTACGACCGG AAGTTCCGCG GGATCGTGAC GCTGACCGCG GCCCTGAAAC AGTCGCTGAA CATTCCGGCG GTGCGGATCA CCGAGGCCGT GGGCCGCGAC AAGGTCCGTC AGGTCGCCTC GGAGTTCGGC ATCCAGAGCA ACCTTGCCGC CGGCCCCGCC CTCGCGCTCG GCGTCTCGGA AGCCACGCTC ATCGAGATGA CGGGCGCCTA TGCCGGCATC CTCAACGGCG GCTCGGCCGT CAAGCCCTAT GGACTCGTGG AACTGCGGCT TCAGGGCGAG GACACGCCGC TCATCGGGCA GGAAGGCGGC ATCGGCGAGC GGGTGATCTC CGAACAGGCG GCGCAGCTTC TGACCTACAT GATGACCGAG GTCATCAACA GCGGCACGGG CACCCGCGCC CGCCTGCCCG ACCGCGAGGC CGCGGGCAAG ACGGGCACGA CGCAGGCTGC GCGCGACGCA TGGTTCGTCG GCTTCACCGC CGACTATGTG GCCGGCGTCT GGATGGGCTA TGACGACAAC ACACCGCTCA AGGGCGTGAC CGGCGGGGGA CTGCCGGCCG AGATCTGGCG CGAGGTGATG GTCCGGGTGC ACGAGGGCGT GCCCCCTGCC CCGTTGCGCA AGATCGTGCC CGAGCCCCGG CTGCCGCCCC AGTCCACGGC CGACGTCCGT ACAGAACCCG TGCCGCAGGA TACGGGCGAC TGGCAGGCCG CCCGGCCGCG GGACACGGGC GACTGGCAGG CTGCACCCCG TCAGCCGAGC GCCGGCGAAC AGATCGTGCG GGACGTGCTC GGGATCTTCG GCGGCGGCCG CAACTGA
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Protein sequence | MRRGFKATSP PHSRPLRVES RKGPQEPEGG QRGMSGSNGR RPPLVADRRY GAPAAKKTTS KGGGGGRGAK PPPKSTPRRR PRKRDPLSAA VAWVLGLIWG IVMFFWRILW GVGWRIAAVV GLVLGLSAYY FYSQLPEVTQ LVDGRARGSV TMLDREGKVF AWRGETYGGL VTSDKVSEHL REAVVATEDR RFYRHFGISP RGIASAVRIN LAEGRGPLEG NGGSTITQQV AKLLCLGVQY DPQQWKSEAD YEADCRRGGI WRKVKEVPFS LAMEAKYTKA EILTIYFNRA YLGAGARGFE AAAQRYFGKS ASQVNAAEAA MLAGLLKAPS YYAPTANLQR ARDRANVIIG LMEEQGYLTR AEAEQARRNP AQLSEAAQSR SGGFFADWVM ESGPAFLTRD TTEDVIIRTT LDQRLQKAAE GALADVFKSK VSEGSKAQAA VVVMSADGAV RAMVGGRKLE AAGSFNRATQ ALRQTGSAFK PFIYAAAMDL GYSPADFVDD SPLTVMVKGS GPWTPANYDR KFRGIVTLTA ALKQSLNIPA VRITEAVGRD KVRQVASEFG IQSNLAAGPA LALGVSEATL IEMTGAYAGI LNGGSAVKPY GLVELRLQGE DTPLIGQEGG IGERVISEQA AQLLTYMMTE VINSGTGTRA RLPDREAAGK TGTTQAARDA WFVGFTADYV AGVWMGYDDN TPLKGVTGGG LPAEIWREVM VRVHEGVPPA PLRKIVPEPR LPPQSTADVR TEPVPQDTGD WQAARPRDTG DWQAAPRQPS AGEQIVRDVL GIFGGGRN
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