Gene Rsph17025_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17025_0117 
Symbol 
ID5082525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17025 
KingdomBacteria 
Replicon accessionNC_009428 
Strand
Start bp119800 
End bp120423 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content67% 
IMG OID640481672 
Producttoluene tolerance family protein 
Protein accessionYP_001166333 
Protein GI146276174 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2854] ABC-type transport system involved in resistance to organic solvents, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.268092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAATG ACCTTTTCTT CGACGCACGG CCCAGCCGCC GGACCGTGAC GCTGGGCCTT 
GCCGCGGGCA TCGCCGCCAC CGTCCTGCCG TGGCGTGCGC TGGCGCTCGA CACCGGAAGC
GCTCGTGCAC TTGTGGTCGA GGCCGTGGCT CAGGTGAATC AGACCATCAA CTCCGGCAAG
TCCGAGCAGC AGATGTATGT CGAGTTCGAG CGCCTCTTCT CGCGCTATGC CGACGTGCGA
GCCATCGCGC GCACCGCTCT GGGGGTCGCT GCCCGCGGCG CGAGCCAGTC CGAGCTTTCC
GCCTTCACCC AGGCCTATCA GGGCTACATC GCGCGCAAGT ACGGCAAGCG ATTCCGCGAG
TTCGTCGGCA GCGAGATCAA GGTGATCGAC GCCCGCCCGA TGAAGAGCGC GGTCGAGGTG
ATCTCGACGG CCTACCTGCG CAACGAGAAT CCGTTCGAGG TGCGCTGGCA TGTGTCGGAT
CGCTCGGGCC GGCCGGCGTT CTTCAACATC ATCATCGAGG GCGTCAACAT GCTTGCCTCC
GAGCGGGCCG AGATCGGGGC GCTGCTCGAC CGGAACCGCG GCTCGATCCC GGCGCTGGCC
GAGCAGCTGC GTCGGTCGAG CTGA
 
Protein sequence
MPNDLFFDAR PSRRTVTLGL AAGIAATVLP WRALALDTGS ARALVVEAVA QVNQTINSGK 
SEQQMYVEFE RLFSRYADVR AIARTALGVA ARGASQSELS AFTQAYQGYI ARKYGKRFRE
FVGSEIKVID ARPMKSAVEV ISTAYLRNEN PFEVRWHVSD RSGRPAFFNI IIEGVNMLAS
ERAEIGALLD RNRGSIPALA EQLRRSS