| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rsph17025_0114 |
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| Symbol | |
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| ID | 5082522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides ATCC 17025 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009428 |
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| Strand | - |
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| Start bp | 115782 |
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| End bp | 117083 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640481669 |
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| Product | HlyD family type I secretion membrane fusion protein |
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| Protein accession | YP_001166330 |
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| Protein GI | 146276171 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0685446 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCT CCCCCTCCTG GTCAAGCCGC AGGCCGCTCC TGATCGGATA CCTCACGCTC
GGCGTTCTCG TCGGCGGCTT CGGCACCTGG AGCGCCTTCT CCTCCATTGC CGGCGCCATC
GTCGTATCGG GCCAGATCGA GGTCGCTCAG AACCGCCAGG TCGTCCAGCA CCCGGATGGC
GGCGTCGTCG AGAGCATCGA GGTCACGGAA GGCGCGAGCG TCCGCGCCGG CGACATCCTG
CTGCGTTTCG ACGGCGCGTC CCTGCGCACC GAACTTGCGA TCGTCGAGGG GCAGCTCTTC
GAGATGCTCG CCCGCCGGGC ACGTCTCGAG GCCGAGCGCG ACGACGCCGA AGCCCTCGCC
TTCCGGCCCG AGCTTCTCGA GGCCGGCAAG GGACGCACCG CCGTCGCCGA GCAGGTCGAG
GGCCAGCAAC GCCTGTTCGT TGCGCGGCGA GAGAGTTTCG CGCAGCAGAT CGACCAGCTC
GGCAAACGCA AGGGCCAGAT CAACAGCCAG ATCGCGGGTG TTGACGCGCA GATGGCAGCG
CTCGGCACGC AGCTTCGCCT GATCGAGGAA GAGCTCACAG ACCAGCAGGG ACTCCTCGCC
AAGGGGCTTG CCCAGGCAAG CCGCGTGCTC AGCCTGCAGC GCGAACAGGC TCGACTGCAA
GGCGAACTGG GCGAGCTCGC AGCTTCACGC GCCAACGCCG AGGGCCGCAT CACGGAACTG
GACATCGAGA TCCTGCGCCT CGGCTCCACG CGCCGCGAGG AGGCCATCAC GCAGCTTCGC
GACTTCGGCT ACCGCGAACT CGAACTGGCA GAGCGGCGGG GCGCACTGAT CGAACAGATC
CAAAGGCTCG ATCTGCGCGC TCCCGTCTCG GGGATCGTCC TCGGCTTGCA GGTGACGACA
CCACGGGCCG TCATTCGCCC CGCCGATCCT GTTCTCTACC TGATCCCCCA AGACCGACCG
CTGGTGATCG CCGCTCAGGT GCCGCCGATC CATGTCGACG AAGTGCGGGA AGGCCAGCCG
GTCCGTCTCG TCTTTTCGGC CTTTTCCAGC CGCACTACGC CCGAACTCGC GGGACATGTA
TCGGTCCTTT CGGCAGATGC CTTGACCGAC AACCGAACGC AGACCGCCTT CTATCGGGCA
GAGATCGCGC TTGAGCCGGG CGAGATGGAG AAATTGGATG ATCGCACTCT TCTTCCCGGC
ATGCCCGTCG AAGCTTTCAT CCGGACGTCG GAACGCTCTC CCATCGCGTA TCTGCTCAAG
CCCTTCACCG ACTATTTCAA CCGCGCCCTG CGGGAAACAT GA
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| Protein sequence | MSRSPSWSSR RPLLIGYLTL GVLVGGFGTW SAFSSIAGAI VVSGQIEVAQ NRQVVQHPDG
GVVESIEVTE GASVRAGDIL LRFDGASLRT ELAIVEGQLF EMLARRARLE AERDDAEALA
FRPELLEAGK GRTAVAEQVE GQQRLFVARR ESFAQQIDQL GKRKGQINSQ IAGVDAQMAA
LGTQLRLIEE ELTDQQGLLA KGLAQASRVL SLQREQARLQ GELGELAASR ANAEGRITEL
DIEILRLGST RREEAITQLR DFGYRELELA ERRGALIEQI QRLDLRAPVS GIVLGLQVTT
PRAVIRPADP VLYLIPQDRP LVIAAQVPPI HVDEVREGQP VRLVFSAFSS RTTPELAGHV
SVLSADALTD NRTQTAFYRA EIALEPGEME KLDDRTLLPG MPVEAFIRTS ERSPIAYLLK
PFTDYFNRAL RET
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